Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00609 and RBAM_003600

See DNA alignment / Visit BSNT_00609 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence pep-align/BSNT_00609___nin.1.9828.seq
#    -bsequence pep-align/RBAM_003600___nin.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00609___nin-RBAM_003600___nin.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00609___nin-RBAM_003600___nin.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00609___nin
# 2: RBAM_003600___nin
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:      99/132 (75.0%)
# Similarity:   117/132 (88.6%)
# Gaps:           0/132 ( 0.0%)
# Score: 543.0
# 
#
#=======================================

BSNT_00609___      1 MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFE     50
                     ||||||||||:|||||||:|||||.||::|||||||||||..||||:|||
RBAM_003600__      1 MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFE     50

BSNT_00609___     51 AQRNTKAFILLRLNSSETVNSYEKKVTVPFHVTENGIHIESIMSKRLSFD    100
                     |:|||:|||:||||:||.|.|||||.||||...::||.|||:|||||.|.
RBAM_003600__     51 ARRNTRAFIVLRLNTSEPVPSYEKKATVPFEAVKDGIEIESVMSKRLFFH    100

BSNT_00609___    101 LPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV    132
                     :|||.|.|||::||||:||||||||||||.::
RBAM_003600__    101 IPKGRYSLTCYSVPAEISDLHADTYIIDAAAM    132


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