Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00609 and RBAM_003600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:21
# Commandline: needle
# -asequence dna-align/BSNT_00609___nin.1.9828.seq
# -bsequence dna-align/RBAM_003600___nin.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00609___nin-RBAM_003600___nin.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00609___nin-RBAM_003600___nin.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00609___nin
# 2: RBAM_003600___nin
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 295/412 (71.6%)
# Similarity: 295/412 (71.6%)
# Gaps: 26/412 ( 6.3%)
# Score: 1041.0
#
#
#=======================================
BSNT_00609___ 1 TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATT 50
|||||.|||||||||||.|||||||||||..|.|||||.|||||||||||
RBAM_003600__ 1 TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATT 50
BSNT_00609___ 51 TACTGTATTTCAAAAGGATTCTACACCTCCTATAATGGATTGGACTGACG 100
|||..|.||.|||||.|||||...|||.|||.|.||.||||||||.||.|
RBAM_003600__ 51 TACAATCTTCCAAAAAGATTCAGAACCGCCTGTTATCGATTGGACCGATG 100
BSNT_00609___ 101 AAGCGATTGAAAAAGGATATACTGCGGCAGACGGAGCCATTTCATTTGAG 150
||||.|||||||||||||||.|.|..||.|||||.||..|||||||||||
RBAM_003600__ 101 AAGCCATTGAAAAAGGATATGCGGAAGCTGACGGGGCTGTTTCATTTGAG 150
BSNT_00609___ 151 GCACAGCGAAATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCA-- 198
|||..|.|||||||.|.|||.|||||..||.|..|.||.|||| ||
RBAM_003600__ 151 GCAAGGAGAAATACGAGGGCATTTATCGTTCTCAGGCTTAACA---CAAG 197
BSNT_00609___ 199 -GAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTTCA---TG 244
|||.|.|||...|||||.||.|||||||.|||||||||.|||.| ||
RBAM_003600__ 198 TGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTTGAGGCTG 247
BSNT_00609___ 245 TCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAGAGACTGTCC 294
| |.||.|.||||||.|.|||||||||.|.|||||.|||.|.||.|.|
RBAM_003600__ 248 T---AAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTC 294
BSNT_00609___ 295 TTTGATCTGCCTAAAGG-------AGACTATCAATTGACATGCTGGACTG 337
|||.||.|.||.||||| ||.| |.||.||.|...|.|
RBAM_003600__ 295 TTTCATATTCCGAAAGGCCGATACAGCC-------TTACCTGTTATTCAG 337
BSNT_00609___ 338 TGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCT 387
||||.||.|||||.||.|||.|.||.|||||.||.||||||||||||||.
RBAM_003600__ 338 TGCCTGCCGAAATATCCGATCTTCATGCCGATACGTATATTATTGATGCA 387
BSNT_00609___ 388 GTTTCTGTGTAA 399
|...|..|||||
RBAM_003600__ 388 GCCGCAATGTAA 399
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