Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00601 and RBAM_003570

See DNA alignment / Visit BSNT_00601 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_00601___yckC.1.9828.seq
#    -bsequence pep-align/RBAM_003570___yckC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00601___yckC-RBAM_003570___yckC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00601___yckC-RBAM_003570___yckC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00601___yckC
# 2: RBAM_003570___yckC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:      96/151 (63.6%)
# Similarity:   123/151 (81.5%)
# Gaps:           7/151 ( 4.6%)
# Score: 534.0
# 
#
#=======================================

BSNT_00601___      1 MNIYKPAGFWIRLGAALLDYIIVSVPLLLIYWLITGKDPNDSMFISLVVL     50
                     ||||:||||||||||.:|||:|.||||.:|:.|.||||||:|..||:::.
RBAM_003570__      1 MNIYRPAGFWIRLGAVVLDYLITSVPLAIIFMLATGKDPNESTMISIILT     50

BSNT_00601___     51 LYSILLPVFWHGYLIGKRICGIRIVKKEGSQVSLLTMFLRVIVAGLVYFI    100
                     ||:|||||:|:||:|||:|||||||||:|:||..|||.|||:|.||:|.:
RBAM_003570__     51 LYAILLPVYWNGYVIGKKICGIRIVKKDGTQVGFLTMILRVLVGGLIYGV    100

BSNT_00601___    101 TFGLGLIASLILIAVREDKRTLHDLIAGTYVTYATPGEEELNTDEEIRKS    150
                     |||:|:|.|..::.:|||||::||.:||||||||.|       ||.|.||
RBAM_003570__    101 TFGIGVIVSAFMVGMREDKRSIHDFVAGTYVTYALP-------DESIEKS    143

BSNT_00601___    151 E    151
                     |
RBAM_003570__    144 E    144


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