Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00584 and RBAM_003540

See DNA alignment / Visit BSNT_00584 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_00584___nasA.1.9828.seq
#    -bsequence pep-align/RBAM_003540___nasA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00584___nasA-RBAM_003540___nasA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00584___nasA-RBAM_003540___nasA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00584___nasA
# 2: RBAM_003540___nasA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity:     363/401 (90.5%)
# Similarity:   379/401 (94.5%)
# Gaps:           0/401 ( 0.0%)
# Score: 1884.0
# 
#
#=======================================

BSNT_00584___      1 MKLSELKTSGHPLTLLCSFLYFDVSFMIWVMLGALGVYISQDFGLSPFEK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_003540__      1 MKLSELKTSGHPLTLLCSFLYFDVSFMIWVMLGALGVYISQDFGLSSFEK     50

BSNT_00584___     51 GLVVAVPILSGSVFRIILGILTDRIGPKKTAVIGMLVTMIPLLWGTFGGR    100
                     |.|||:|||||||||||||:||||||||||||||||:||||||||.||||
RBAM_003540__     51 GFVVALPILSGSVFRIILGVLTDRIGPKKTAVIGMLITMIPLLWGAFGGR    100

BSNT_00584___    101 SLTELYAIGILLGVAGASFAVALPMASRWYPPHLQGLAMGIAGAGNSGTL    150
                     |||||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_003540__    101 SLTELFAIGILLGVAGASFAVALPMASRWYPPHLQGLAMGIAGAGNSGTL    150

BSNT_00584___    151 FATLFGPRLAEQFGWHIVMGIALIPLLIVFILFVSMAKDSPAQPSPQPLK    200
                     ||||||||||||||||.||||||.||:||||||:.|||||||||:|||||
RBAM_003540__    151 FATLFGPRLAEQFGWHSVMGIALFPLMIVFILFIVMAKDSPAQPAPQPLK    200

BSNT_00584___    201 SYLHVFGQKETWFFCLLYSVTFGGFVGLSSFLSIFFVDQYQLSKIHAGDF    250
                     :|||||.|||||.|||||.|||||||||||||:|||||||||||||||||
RBAM_003540__    201 NYLHVFRQKETWCFCLLYGVTFGGFVGLSSFLAIFFVDQYQLSKIHAGDF    250

BSNT_00584___    251 VTLCVAAGSFFRPVGGLISDRVGGTKVLSVLFVIVALCMAGVSSLPSLSM    300
                     ||:||||||||||.||.||||.||.|||:|||||.|||||||||||.||.
RBAM_003540__    251 VTICVAAGSFFRPAGGWISDRAGGAKVLAVLFVIAALCMAGVSSLPPLST    300

BSNT_00584___    301 VIVLLFVGMMGLGMGNGAVFQLVPQRFRKEIGMVTGIVGAAGGIGGFFLP    350
                     ||||||:|||.||||||||||||||.|.||||||||||||||||||||||
RBAM_003540__    301 VIVLLFIGMMALGMGNGAVFQLVPQHFAKEIGMVTGIVGAAGGIGGFFLP    350

BSNT_00584___    351 NILGSLKQMTGTYAIGFITFSCIALLAFALVLAAGYYWRKSWSAESSPAD    400
                     ||||||||||||||||||:|||||||||.|||||||:||||:..|:||||
RBAM_003540__    351 NILGSLKQMTGTYAIGFISFSCIALLAFVLVLAAGYFWRKSYGTENSPAD    400

BSNT_00584___    401 V    401
                     |
RBAM_003540__    401 V    401


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