Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00584 and RBAM_003540
See
DNA alignment /
Visit
BSNT_00584 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:20
# Commandline: needle
# -asequence pep-align/BSNT_00584___nasA.1.9828.seq
# -bsequence pep-align/RBAM_003540___nasA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00584___nasA-RBAM_003540___nasA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00584___nasA-RBAM_003540___nasA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00584___nasA
# 2: RBAM_003540___nasA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 363/401 (90.5%)
# Similarity: 379/401 (94.5%)
# Gaps: 0/401 ( 0.0%)
# Score: 1884.0
#
#
#=======================================
BSNT_00584___ 1 MKLSELKTSGHPLTLLCSFLYFDVSFMIWVMLGALGVYISQDFGLSPFEK 50
||||||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_003540__ 1 MKLSELKTSGHPLTLLCSFLYFDVSFMIWVMLGALGVYISQDFGLSSFEK 50
BSNT_00584___ 51 GLVVAVPILSGSVFRIILGILTDRIGPKKTAVIGMLVTMIPLLWGTFGGR 100
|.|||:|||||||||||||:||||||||||||||||:||||||||.||||
RBAM_003540__ 51 GFVVALPILSGSVFRIILGVLTDRIGPKKTAVIGMLITMIPLLWGAFGGR 100
BSNT_00584___ 101 SLTELYAIGILLGVAGASFAVALPMASRWYPPHLQGLAMGIAGAGNSGTL 150
|||||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_003540__ 101 SLTELFAIGILLGVAGASFAVALPMASRWYPPHLQGLAMGIAGAGNSGTL 150
BSNT_00584___ 151 FATLFGPRLAEQFGWHIVMGIALIPLLIVFILFVSMAKDSPAQPSPQPLK 200
||||||||||||||||.||||||.||:||||||:.|||||||||:|||||
RBAM_003540__ 151 FATLFGPRLAEQFGWHSVMGIALFPLMIVFILFIVMAKDSPAQPAPQPLK 200
BSNT_00584___ 201 SYLHVFGQKETWFFCLLYSVTFGGFVGLSSFLSIFFVDQYQLSKIHAGDF 250
:|||||.|||||.|||||.|||||||||||||:|||||||||||||||||
RBAM_003540__ 201 NYLHVFRQKETWCFCLLYGVTFGGFVGLSSFLAIFFVDQYQLSKIHAGDF 250
BSNT_00584___ 251 VTLCVAAGSFFRPVGGLISDRVGGTKVLSVLFVIVALCMAGVSSLPSLSM 300
||:||||||||||.||.||||.||.|||:|||||.|||||||||||.||.
RBAM_003540__ 251 VTICVAAGSFFRPAGGWISDRAGGAKVLAVLFVIAALCMAGVSSLPPLST 300
BSNT_00584___ 301 VIVLLFVGMMGLGMGNGAVFQLVPQRFRKEIGMVTGIVGAAGGIGGFFLP 350
||||||:|||.||||||||||||||.|.||||||||||||||||||||||
RBAM_003540__ 301 VIVLLFIGMMALGMGNGAVFQLVPQHFAKEIGMVTGIVGAAGGIGGFFLP 350
BSNT_00584___ 351 NILGSLKQMTGTYAIGFITFSCIALLAFALVLAAGYYWRKSWSAESSPAD 400
||||||||||||||||||:|||||||||.|||||||:||||:..|:||||
RBAM_003540__ 351 NILGSLKQMTGTYAIGFISFSCIALLAFVLVLAAGYFWRKSYGTENSPAD 400
BSNT_00584___ 401 V 401
|
RBAM_003540__ 401 V 401
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.