Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00580 and RBAM_003500

See DNA alignment / Visit BSNT_00580 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:19
# Commandline: needle
#    -asequence pep-align/BSNT_00580___nasE.1.9828.seq
#    -bsequence pep-align/RBAM_003500___nasE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00580___nasE-RBAM_003500___nasE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00580___nasE-RBAM_003500___nasE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00580___nasE
# 2: RBAM_003500___nasE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      97/106 (91.5%)
# Similarity:   104/106 (98.1%)
# Gaps:           0/106 ( 0.0%)
# Score: 535.0
# 
#
#=======================================

BSNT_00580___      1 MVNKDVTKVCIGKIEELPEQLGKTVYIEDKELAVFKLSDGSIRAIENRCP     50
                     |||||:|||||||:.||||:|||||||||||||||||||||:||:|||||
RBAM_003500__      1 MVNKDMTKVCIGKVNELPEELGKTVYIEDKELAVFKLSDGSVRAVENRCP     50

BSNT_00580___     51 HKGGVLAEGIVSGEYVFCPMHDWKISLEDGIVQEPDHGCVKTYETLIEGE    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_003500__     51 HKGGVLAEGIVSGEYVFCPMHDWKISLEDGKVQEPDHGCVKTYETLIEGE    100

BSNT_00580___    101 HVYLVY    106
                     :|||:|
RBAM_003500__    101 NVYLLY    106


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