Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00580 and RBAM_003500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence dna-align/BSNT_00580___nasE.1.9828.seq
# -bsequence dna-align/RBAM_003500___nasE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00580___nasE-RBAM_003500___nasE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00580___nasE-RBAM_003500___nasE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00580___nasE
# 2: RBAM_003500___nasE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 263/321 (81.9%)
# Similarity: 263/321 (81.9%)
# Gaps: 0/321 ( 0.0%)
# Score: 1083.0
#
#
#=======================================
BSNT_00580___ 1 ATGGTAAACAAAGACGTAACAAAAGTATGTATCGGAAAAATTGAAGAATT 50
|||||.||.|||||..|.|||||.||.||.||.||.|||.|..|.|||||
RBAM_003500__ 1 ATGGTGAATAAAGATATGACAAAGGTTTGCATAGGCAAAGTAAACGAATT 50
BSNT_00580___ 51 GCCTGAACAATTAGGCAAAACAGTGTATATTGAAGATAAGGAGCTCGCGG 100
.||.||..|.|||||.|||||.||.|||||.||||||||.|||||.||.|
RBAM_003500__ 51 ACCCGAGGAGTTAGGAAAAACCGTATATATAGAAGATAAAGAGCTTGCCG 100
BSNT_00580___ 101 TTTTCAAGCTTTCAGACGGAAGCATCCGCGCCATCGAAAACCGCTGTCCG 150
|.||.||||||||.|||||.|||.||||||||.|||||||.||||||||.
RBAM_003500__ 101 TATTTAAGCTTTCTGACGGGAGCGTCCGCGCCGTCGAAAATCGCTGTCCC 150
BSNT_00580___ 151 CATAAGGGCGGCGTCCTGGCAGAAGGCATCGTCAGCGGTGAATATGTTTT 200
|||||.||.|||||||||||.|||||||||||||||||.||||||||.||
RBAM_003500__ 151 CATAAAGGGGGCGTCCTGGCTGAAGGCATCGTCAGCGGAGAATATGTCTT 200
BSNT_00580___ 201 CTGCCCGATGCACGACTGGAAAATTTCCTTAGAAGACGGAATCGTCCAAG 250
||||||.|||||.|||||||||||.||||||||||||||||..|||||||
RBAM_003500__ 201 CTGCCCAATGCATGACTGGAAAATCTCCTTAGAAGACGGAAAAGTCCAAG 250
BSNT_00580___ 251 AACCTGACCACGGATGTGTCAAAACATATGAAACGCTGATCGAAGGAGAA 300
|.||.||.||.||.||||||||||||||.|||||.|||||.||||||||.
RBAM_003500__ 251 AGCCGGATCATGGCTGTGTCAAAACATACGAAACACTGATTGAAGGAGAG 300
BSNT_00580___ 301 CATGTTTATCTCGTATATTGA 321
.||||.||.|||.|.||||||
RBAM_003500__ 301 AATGTATACCTCCTGTATTGA 321
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