Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00579 and RBAM_003490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence pep-align/BSNT_00579___nasF.1.9828.seq
# -bsequence pep-align/RBAM_003490___nasF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00579___nasF-RBAM_003490___nasF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00579___nasF-RBAM_003490___nasF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00579___nasF
# 2: RBAM_003490___nasF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity: 356/481 (74.0%)
# Similarity: 414/481 (86.1%)
# Gaps: 2/481 ( 0.4%)
# Score: 1903.0
#
#
#=======================================
BSNT_00579___ 1 MKNGIVYFVGAGPGDPGLLTIKGKQALEEADVILYDRLANPKLLEFASPD 50
||||||||||||||||||:|:|||||||:||:||||||||||.||:||||
RBAM_003490__ 1 MKNGIVYFVGAGPGDPGLITVKGKQALEKADIILYDRLANPKFLEYASPD 50
BSNT_00579___ 51 CQFIYCGKLPNRHFMKQKEINALLVEKALNGLTVVRLKGGDPSVFGRVGE 100
|:||||||||:||||||.||||||:|||..|.||||||||||||||||||
RBAM_003490__ 51 CRFIYCGKLPDRHFMKQSEINALLIEKAAEGFTVVRLKGGDPSVFGRVGE 100
BSNT_00579___ 101 EADALHEHGIRYEMVPGITSGIAAPLYAGIPVTHRDFASSFAMITAHDKS 150
||:|||:||||||||||||||||||||||:||||||||||||||||||.|
RBAM_003490__ 101 EAEALHQHGIRYEMVPGITSGIAAPLYAGVPVTHRDFASSFAMITAHDTS 150
BSNT_00579___ 151 LKGTPNLDWEGLARSVQTLVFYMGVKNLSYICQQLISYGKSPSVPVIVIQ 200
|.|.|||||||||||||||||||||||||:||::|..|||||||||:|||
RBAM_003490__ 151 LHGRPNLDWEGLARSVQTLVFYMGVKNLSFICRKLTEYGKSPSVPVLVIQ 200
BSNT_00579___ 201 WGTWGRQRSVKGTLENIQQKVQEHQITNPAIIVIGDIVNFQTHSWFESKP 250
||||||||||||||::|.:|||...|||||||||||||||||||||||||
RBAM_003490__ 201 WGTWGRQRSVKGTLQDIHEKVQSQNITNPAIIVIGDIVNFQTHSWFESKP 250
BSNT_00579___ 251 LIGRHLMVVTHGEDEDPLADKLRDSGADVIEWPKWRTENMPVNEEILRKI 300
.||||:||||||::|..|.||||:.|||||||||...:.||.||.||::|
RBAM_003490__ 251 FIGRHIMVVTHGDEEHTLTDKLREYGADVIEWPKRIVKKMPANENILKQI 300
BSNT_00579___ 301 GIFEDVFFTSRRVVCEFFRALASQKIDIRQLTAKLSAASEQAKTELEKRG 350
..||.:|||||..|||||..||.::||||::||.|:||:|.|||||.|||
RBAM_003490__ 301 STFEQLFFTSRLAVCEFFDTLAFKQIDIRRVTASLNAATEAAKTELTKRG 350
BSNT_00579___ 351 FLVTATQPDSEKCLVVGSRHAVEFMQKHESCSFYITHENVIDDRFTHMIQ 400
||::..|.||...|:||||.|.|.:...:||.||||||::.|:|||.||:
RBAM_003490__ 351 FLLSECQIDSPHSLIVGSRQAAENLSDSKSCPFYITHEHIADERFTSMIE 400
BSNT_00579___ 401 RTISESPLHMVICPNKLSVQQLINGGEQIGISPEPSASRPPIVCIGDDSA 450
||||||||.|:||..|.|.|.||:.|:||||||:|||:|||::|:|:|..
RBAM_003490__ 401 RTISESPLQMIICTGKESAQHLISAGKQIGISPDPSANRPPVICMGEDVP 450
BSNT_00579___ 451 AGAYGFTAIQEQDELFAFIQNQQAEKKLLHS 481
||. ||||::.|::|||||:|:..: .|:||
RBAM_003490__ 451 AGC-GFTAVKNQEQLFAFIRNEMKD-MLVHS 479
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