Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00579 and RBAM_003490
See
Amino acid alignment /
Visit
BSNT_00579 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence dna-align/BSNT_00579___nasF.1.9828.seq
# -bsequence dna-align/RBAM_003490___nasF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00579___nasF-RBAM_003490___nasF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00579___nasF-RBAM_003490___nasF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00579___nasF
# 2: RBAM_003490___nasF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1495
# Identity: 1114/1495 (74.5%)
# Similarity: 1114/1495 (74.5%)
# Gaps: 104/1495 ( 7.0%)
# Score: 4134.5
#
#
#=======================================
BSNT_00579___ 1 ATGAAGAATGGAATCGTTTATTTCGTGGGAGCCGGACCCGGCGACCCAGG 50
|||||.||.||||||||.|||||.||.||.||||||||.||.|||||.||
RBAM_003490__ 1 ATGAAAAACGGAATCGTATATTTTGTCGGTGCCGGACCAGGAGACCCGGG 50
BSNT_00579___ 51 CCTGCTCACCATCAAAGGAAAACAGGCGCTCGAGGAAGCAGATGTCATTT 100
.|||.|||||.|.||||||||||||||.||.|||.||||.|||.|.||||
RBAM_003490__ 51 GCTGATCACCGTAAAAGGAAAACAGGCTCTGGAGAAAGCGGATATTATTT 100
BSNT_00579___ 101 TATATGACCGGCTCGCCAACCCGAAGCTGCTCGAATTTGCATCACCGGAT 150
|.||||||||||||||.|||||.|||.|.||.||||.|||.||||||||.
RBAM_003490__ 101 TGTATGACCGGCTCGCAAACCCAAAGTTTCTTGAATATGCCTCACCGGAC 150
BSNT_00579___ 151 TGCCAGTTTATTTATTGCGGAAAACTGCCAAACCGCCATTTTATGAAACA 200
||||.|||.||||||||||||||.|||||..|||||||||||||||||||
RBAM_003490__ 151 TGCCGGTTCATTTATTGCGGAAAGCTGCCCGACCGCCATTTTATGAAACA 200
BSNT_00579___ 201 AAAAGAAATTAACGCCCTGCTGGTTGAAAAAGCATTAAATGGGTTAACCG 250
....||.||.||.|||||||||.||||||||||.....|.||.||.||||
RBAM_003490__ 201 GTCTGAGATAAATGCCCTGCTGATTGAAAAAGCGGCGGAGGGCTTCACCG 250
BSNT_00579___ 251 TCGTTCGCTTGAAGGGCGGAGATCCGAGCGTATTCGGCAGGGTCGGCGAG 300
|.||.||||||||.||||||||.||.||.||.||||||||.||||||||.
RBAM_003490__ 251 TTGTCCGCTTGAAAGGCGGAGACCCAAGTGTGTTCGGCAGAGTCGGCGAA 300
BSNT_00579___ 301 GAAGCAGATGCTCTTCATGAGCACGGCATTCGCTATGAAATGGTGCCGGG 350
||||||||.||.||||||.||||||||||.|||||.|||||||||||.||
RBAM_003490__ 301 GAAGCAGAGGCGCTTCATCAGCACGGCATCCGCTACGAAATGGTGCCCGG 350
BSNT_00579___ 351 AATCACCTCTGGAATTGCAGCGCCGCTATATGCGGGCATCCCCGTCACGC 400
.||||||||.|||||.|||||||||||.||||||||..||||||||||.|
RBAM_003490__ 351 CATCACCTCGGGAATCGCAGCGCCGCTGTATGCGGGAGTCCCCGTCACTC 400
BSNT_00579___ 401 ATCGGGATTTCGCATCGTCTTTTGCCATGATTACAGCGCATGATAAATCA 450
||||.||||||||.|||||.||.||.|||||.||.||.|||||||.||||
RBAM_003490__ 401 ATCGTGATTTCGCTTCGTCCTTCGCGATGATCACCGCTCATGATACATCA 450
BSNT_00579___ 451 TTAAAAGGCACGCCGAACCTTGACTGGGAAGGGCTTGCACGAAGCGTACA 500
||..|.||||.||||||.||.|||||||||||||||||.||||||||.||
RBAM_003490__ 451 TTGCACGGCAGGCCGAATCTCGACTGGGAAGGGCTTGCCCGAAGCGTTCA 500
BSNT_00579___ 501 AACCCTTGTTTTTTACATGGGTGTCAAGAACTTGTCTTATATTTGCCAGC 550
|||.|||||.|||||||||||.||.||.||..||||.|.|||.||||...
RBAM_003490__ 501 AACGCTTGTGTTTTACATGGGCGTTAAAAATCTGTCATTTATATGCCGTA 550
BSNT_00579___ 551 AGCTTATTTCATACGGGAAATCGCCTTCTGTCCCTGTCATTGTCATCCAA 600
||||||.....|||||.|||||.|||||.||.||.||..|.|||||.|||
RBAM_003490__ 551 AGCTTACGGAGTACGGAAAATCCCCTTCCGTTCCCGTACTCGTCATTCAA 600
BSNT_00579___ 601 TGGGGAACGTGGGGCCGCCAGCGGAGTGTGAAAGGAACACTTGAGAACAT 650
|||||.||||||||.||.||||||||.||.||||||||.|||.||.|.||
RBAM_003490__ 601 TGGGGGACGTGGGGGCGGCAGCGGAGCGTTAAAGGAACGCTTCAGGATAT 650
BSNT_00579___ 651 TCAGCAAAAAGTGCAGGAG-CACCAGATCACAAACCCTGCCATTATTGTC 699
.||..|||||||.|| .|| ||..|.|||||.||||||||||||||.|||
RBAM_003490__ 651 CCATGAAAAAGTTCA-AAGCCAAAACATCACCAACCCTGCCATTATCGTC 699
BSNT_00579___ 700 ATCGGAGACATCGTCAACTTTCAAACACACAGCTGGTTTGAAAGCAAACC 749
|||||.||.||.|||||.|||||||||||||||||||||||||||||.||
RBAM_003490__ 700 ATCGGTGATATTGTCAATTTTCAAACACACAGCTGGTTTGAAAGCAAGCC 749
BSNT_00579___ 750 GCTCATCGGACGGCATTTGATGGTTGTGACTCATGGCGAAGATGAAGACC 799
|.|||||||.||||||.|.||||||||.|||||||||||.||.|||.|..
RBAM_003490__ 750 GTTCATCGGGCGGCATATCATGGTTGTCACTCATGGCGATGAAGAACATA 799
BSNT_00579___ 800 CGCTTG-CAGACAAGCTGCGCGATTCCGGCGCCGATGTCATCGAGTGGCC 848
| .||| ||||||||||||||||.|..|||||||||||.||.||.|||||
RBAM_003490__ 800 C-ATTGACAGACAAGCTGCGCGAGTATGGCGCCGATGTTATTGAATGGCC 848
BSNT_00579___ 849 GAAATGGCGGACCG---AAAACATGCCAGTCAATGAAGAAATTCTTCGAA 895
||| |||||.|| ||||.|||||.|..||.|||.|.||.|| |||
RBAM_003490__ 849 GAA---GCGGATCGTTAAAAAAATGCCCGCAAACGAAAACATCCT--GAA 893
BSNT_00579___ 896 --AGATTGGCATCTTTGAAGACGTTTTTTTCACATCGCGCCGGGTGGTTT 943
||||..|||.|||||||.|..|.|||||||||||.||||..|.|||.|
RBAM_003490__ 894 ACAGATCAGCACCTTTGAACAACTATTTTTCACATCACGCCTTGCGGTAT 943
BSNT_00579___ 944 GTGAATT-TTTCAGAGCACTGGCTTCTC-AGAAAATCGACATCCGCCAGC 991
|.||||| |||.|.| ||||||||| || ||.|.|||||||||||||.|.
RBAM_003490__ 944 GCGAATTCTTTGACA-CACTGGCTT-TCAAGCAGATCGACATCCGCCGGG 991
BSNT_00579___ 992 TGACAGCCAAACTGAGTGCAGCATCTGAACAAGCAAAGACGGAGCTTGA- 1040
||||.||.|..||||.||||||..||||....|||||||||||.| |||
RBAM_003490__ 992 TGACCGCAAGCCTGAATGCAGCGACTGAGGCCGCAAAGACGGAAC-TGAC 1040
BSNT_00579___ 1041 AAAACGGGGGTTTCT----------TGTCA----------CCGCCACTCA 1070
|||||||||.||||| ||||| ||||
RBAM_003490__ 1041 AAAACGGGGCTTTCTCCTATCCGAATGTCAAATTGATTCTCCGC------ 1084
BSNT_00579___ 1071 GCCTGATTCAGAGAAATGTCTTGTTGTCGGGAGCCGCCATGCAGTGGAAT 1120
||||| ||..||||.||.|||||.||.||||..|||.
RBAM_003490__ 1085 -----ATTCA---------CTCATTGTAGGAAGCCGTCAAGCAGCAGAAA 1120
BSNT_00579___ 1121 TCATG-------CAAAAGCATGAATCCTGTTCGTTTTATATCACTCATGA 1163
.|.|| |||||.|||| || |||||||||||||.|||||
RBAM_003490__ 1121 ACTTGTCAGACTCAAAATCATG---CC----CGTTTTATATCACCCATGA 1163
BSNT_00579___ 1164 AAACGTCATAGATGACCGGTTCACCCACATGATTCAGCGTACCATCAGTG 1213
|.|..||..||||||.||||||||...||||||..|.||.||.|||||||
RBAM_003490__ 1164 ACATATCGCAGATGAGCGGTTCACTTCCATGATCGAACGCACGATCAGTG 1213
BSNT_00579___ 1214 AATCCCCGCTGCACATGGTCATTTG----CCCGAACAAGCTGTCCGTTCA 1259
|.||.||.|||||.|||.|.||.|| ..|.||.|| ||||.|||
RBAM_003490__ 1214 AGTCTCCTCTGCAAATGATTATCTGTACTGGCAAAGAA----TCCGCTCA 1259
BSNT_00579___ 1260 GCAATTGATCAATGGTGGCGAACAAATTGGCATTTCGCCGGAACCGTCAG 1309
|||.|||||||..|..||..|||||||.|||||.||.|||||.|||||||
RBAM_003490__ 1260 GCATTTGATCAGCGCCGGAAAACAAATCGGCATATCACCGGATCCGTCAG 1309
BSNT_00579___ 1310 CAAGCCGGCCTCCTATCGTCTGTATAGGCGATGAC-TCAGCTGCCGG-GG 1357
|||.|||.|||||..||.||||.||.|||||.||| || .|.||||| .|
RBAM_003490__ 1310 CAAACCGCCCTCCCGTCATCTGCATGGGCGAAGACGTC-CCCGCCGGCTG 1358
BSNT_00579___ 1358 CTTATGGATTCACAGCCATCCAAGAACAGGATGAATTGTTTGCTTTCATC 1407
| ||.||.||.|||.|..||.|.|||||..|.||.|||||.||.||.
RBAM_003490__ 1359 C----GGGTTTACCGCCGTGAAAAATCAGGAACAGTTATTTGCGTTTATA 1404
BSNT_00579___ 1408 CAAAATCAACAAGCGGAAAAAAAA------CTCCTTCACAGCTGA 1446
|.|||| ||||..||| |||.|||||||||||
RBAM_003490__ 1405 CGAAAT---------GAAATGAAAGACATGCTCGTTCACAGCTGA 1440
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.