Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00564 and RBAM_003420

See DNA alignment / Visit BSNT_00564 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:18
# Commandline: needle
#    -asequence pep-align/BSNT_00564___cah.1.9828.seq
#    -bsequence pep-align/RBAM_003420___cah.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00564___cah-RBAM_003420___cah.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00564___cah-RBAM_003420___cah.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00564___cah
# 2: RBAM_003420___cah
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     268/318 (84.3%)
# Similarity:   291/318 (91.5%)
# Gaps:           0/318 ( 0.0%)
# Score: 1449.0
# 
#
#=======================================

BSNT_00564___      1 MQLFDLPLDQLQTYKPEKTAPKDFSEFWKLSLEELAKVQAEPDLQPVDYP     50
                     |||:||||||||||||.||||.|||:||..||.||||.:|:|:|:...||
RBAM_003420__      1 MQLYDLPLDQLQTYKPNKTAPHDFSDFWASSLHELAKEEAKPELKAESYP     50

BSNT_00564___     51 ADGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAMVKYHGYNASYDGEIH    100
                     ||||||:||||:|||.|.|.|||||||::|||||:||||||||||||:||
RBAM_003420__     51 ADGVKVFRLTYRSFGKAEIEGWYAVPDRQGPHPAIVKYHGYNASYDGDIH    100

BSNT_00564___    101 EMVNWALHGYAAFGMLVRGQQSSEDTSISPHGHALGWMTKGILDKDTYYY    150
                     ::||||||||||||||||||.||.|||:|||||..|||||||||||||||
RBAM_003420__    101 DIVNWALHGYAAFGMLVRGQHSSTDTSVSPHGHVPGWMTKGILDKDTYYY    150

BSNT_00564___    151 RGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAA    200
                     |||||||||||||||.|||||||||.|.||||||||:||||||||||:|.
RBAM_003420__    151 RGVYLDAVRALEVISGFDEVDETRIAVIGGSQGGGLSIAAAALSDIPRAV    200

BSNT_00564___    201 VADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDI    250
                     .|||||||||||||||||::||||||||||:|||||||..||.||:||||
RBAM_003420__    201 AADYPYLSNFERAIDVALDEPYLEINSFFRKNGSPETEKAAMNTLAYFDI    250

BSNT_00564___    251 MNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETEKELKVYRYFGHEY    300
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_003420__    251 MNLADRVKVPVLMSIGLIDRVTPPSTVFAAYNHLETEKELKVYRYFGHEY    300

BSNT_00564___    301 IPAFQTEKLAFFKQHLKG    318
                     ||:|.||||||.|.||||
RBAM_003420__    301 IPSFHTEKLAFLKAHLKG    318


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