Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00558 and RBAM_003410

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:18
# Commandline: needle
#    -asequence pep-align/BSNT_00558___aroK.1.9828.seq
#    -bsequence pep-align/RBAM_003410___aroK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00558___aroK-RBAM_003410___aroK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00558___aroK-RBAM_003410___aroK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00558___aroK
# 2: RBAM_003410___aroK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity:     171/186 (91.9%)
# Similarity:   179/186 (96.2%)
# Gaps:           0/186 ( 0.0%)
# Score: 908.0
# 
#
#=======================================

BSNT_00558___      1 MNAKRAIPVRERNIVLIGFMGVGKTTIGQLVAKKLYRDFIDIDQQIEKDF     50
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
RBAM_003410__      1 MNAKRAIPVRERNIVLIGFMGVGKTTIGQLVAKKLYRDFIDIDLQIEKDF     50

BSNT_00558___     51 NMSIPEIFEKKGEDFFRKTEKEYILDICHHKRFKIVSLGGGSFKQEEIRN    100
                     ||||||:||||||.|||:|||:||||||.:.:|||||||||||||||||.
RBAM_003410__     51 NMSIPEMFEKKGEAFFRQTEKDYILDICRNTKFKIVSLGGGSFKQEEIRQ    100

BSNT_00558___    101 CCLENCLVLHLDLSWENWKQRADLLIESRPVLHNRSMDEMEQLFNERKVI    150
                     ||||||||||||||||||||||||||||||||||||||||:||||||:.|
RBAM_003410__    101 CCLENCLVLHLDLSWENWKQRADLLIESRPVLHNRSMDEMQQLFNERQSI    150

BSNT_00558___    151 YDKHNSKVATDNLSPEEVADYIVETLKIGWDLYQPM    186
                     |||||||||||||.|||:||||||||||||||||||
RBAM_003410__    151 YDKHNSKVATDNLEPEEIADYIVETLKIGWDLYQPM    186


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