Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00556 and RBAM_003380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:18
# Commandline: needle
# -asequence pep-align/BSNT_00556___tmrB.1.9828.seq
# -bsequence pep-align/RBAM_003380___tmrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00556___tmrB-RBAM_003380___tmrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00556___tmrB-RBAM_003380___tmrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00556___tmrB
# 2: RBAM_003380___tmrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 198
# Identity: 154/198 (77.8%)
# Similarity: 178/198 (89.9%)
# Gaps: 1/198 ( 0.5%)
# Score: 841.0
#
#
#=======================================
BSNT_00556___ 1 -MIIWINGAFGSGKTQTAFELHRRLSPSYVYDPEKMGFALRSMVPQEIAK 49
||||||||||||||||||||||||.|||||||||||||:|||:|.:||:
RBAM_003380__ 1 MMIIWINGAFGSGKTQTAFELHRRLKPSYVYDPEKMGFAMRSMIPPDIAE 50
BSNT_00556___ 50 DDFQSYPLWRAFNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQE 99
||||||||||.||||:|:.|:|||:||:||||||.:.:||::||.||||:
RBAM_003380__ 51 DDFQSYPLWREFNYSMLSYLSDTYQGIIIVPMTITNDQYFHDIISRLRQD 100
BSNT_00556___ 100 GRIVHHFTLMASKETLLKRLRTRAEGKNSWAAKQIDRCVEGLSSPIFEDH 149
||.:|||||:||||||||||||||||||||||||||||:..||..:|.:|
RBAM_003380__ 101 GRTIHHFTLLASKETLLKRLRTRAEGKNSWAAKQIDRCINSLSDSLFTEH 150
BSNT_00556___ 150 IQTDNLSIQDVAENIAARAELPLDPDTRGSLRRFADRLMVKLNHIRIK 197
:.||.:|||.|||.|||:|.|||:||:|||||||.|||||||||||||
RBAM_003380__ 151 LHTDQMSIQQVAETIAAQANLPLEPDSRGSLRRFTDRLMVKLNHIRIK 198
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