Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00555 and RBAM_003360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:18
# Commandline: needle
# -asequence pep-align/BSNT_00555___nadE.1.9828.seq
# -bsequence pep-align/RBAM_003360___nadE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00555___nadE-RBAM_003360___nadE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00555___nadE-RBAM_003360___nadE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00555___nadE
# 2: RBAM_003360___nadE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity: 240/272 (88.2%)
# Similarity: 262/272 (96.3%)
# Gaps: 0/272 ( 0.0%)
# Score: 1262.0
#
#
#=======================================
BSNT_00555___ 1 MSMQEKIMRELHVKPSIDPKQEIEDRVNFLKQYVKKTGAKGFVLGISGGQ 50
||:|::||.:|||||||||||||||||||||||:||||||||||||||||
RBAM_003360__ 1 MSIQKQIMNDLHVKPSIDPKQEIEDRVNFLKQYLKKTGAKGFVLGISGGQ 50
BSNT_00555___ 51 DSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQQDEDDAQLALKFIKP 100
||||||||||||.||||||||:|:||||||||||||||||||:|||||||
RBAM_003360__ 51 DSTLAGRLAQLAAESIREEGGNAEFIAVRLPHGTQQDEDDAQMALKFIKP 100
BSNT_00555___ 101 DKSWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQ 150
||||.|||||.||||:|||:::|||||:||||||||||.|||||||||||
RBAM_003360__ 101 DKSWTFDIKSAVSAFTDQYKKDTGDQLSDFNKGNVKARMRMIAQYAIGGQ 150
BSNT_00555___ 151 EGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRTLLKELGAP 200
|||||:|||||||||||||||||||||||||||||||||||.||:|||||
RBAM_003360__ 151 EGLLVIGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRRLLEELGAP 200
BSNT_00555___ 201 ERLYLKEPTADLLDEKPQQSDETELGISYDEIDDYLEGKEVSAKVSEALE 250
||||||.||||||||||||:|||||||:|::||||||||:||::|.||||
RBAM_003360__ 201 ERLYLKLPTADLLDEKPQQTDETELGITYNDIDDYLEGKDVSSEVIEALE 250
BSNT_00555___ 251 KRYSMTEHKRQVPASMFDDWWK 272
|||..|||||||||||||||||
RBAM_003360__ 251 KRYLSTEHKRQVPASMFDDWWK 272
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