Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00551 and RBAM_003350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence pep-align/BSNT_00551.1.9828.seq
# -bsequence pep-align/RBAM_003350___ycgI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00551-RBAM_003350___ycgI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00551-RBAM_003350___ycgI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00551
# 2: RBAM_003350___ycgI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 146/200 (73.0%)
# Similarity: 153/200 (76.5%)
# Gaps: 30/200 (15.0%)
# Score: 769.5
#
#
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BSNT_00551 1 MTQQYIVEPKKGLGLKLKKGQILKVVDVEGQQVADFVAYHAKDFYEHLDQ 50
||||:||.||||||||:.||||:|||||||||||||.|||||||||||||
RBAM_003350__ 1 MTQQFIVPPKKGLGLKVHKGQIIKVVDVEGQQVADFTAYHAKDFYEHLDQ 50
BSNT_00551 51 GATIDANHSIHVKVNDHLYSNLYKPMLTLIEDTVGKHDLLLPACRPDMNR 100
|||||||.|||||..||:||||||||||||||||||||||||||||||||
RBAM_003350__ 51 GATIDANQSIHVKTGDHIYSNLYKPMLTLIEDTVGKHDLLLPACRPDMNR 100
BSNT_00551 101 LLYGKQKDEFQDTCYDNMNRALEQFGVPKPHMHYPFAIFMNTVLDEKGNL 150
|||||.|||.||||||||:.|||.||||:|||||||||||||||||||||
RBAM_003350__ 101 LLYGKHKDELQDTCYDNMSGALEPFGVPRPHMHYPFAIFMNTVLDEKGNL 150
BSNT_00551 151 SVETPLSNAGDGFNCRVFFLPD---------------------------- 172
|||||||:|||....|... |
RBAM_003350__ 151 SVETPLSDAGDYVRLRAEM--DLVVAFSSCPIEKGKCNGDSITALRVEIS 198
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