Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00551 and RBAM_003350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence dna-align/BSNT_00551.1.9828.seq
# -bsequence dna-align/RBAM_003350___ycgI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00551-RBAM_003350___ycgI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00551-RBAM_003350___ycgI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00551
# 2: RBAM_003350___ycgI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 601
# Identity: 423/601 (70.4%)
# Similarity: 423/601 (70.4%)
# Gaps: 86/601 (14.3%)
# Score: 1703.0
#
#
#=======================================
BSNT_00551 1 ATGACACAGCAATATATTGTGGAGCCGAAAAAAGGGCTGGGGCTGAAGCT 50
|||||||||||||.||||||...|||||||||||||||.||.||||||.|
RBAM_003350__ 1 ATGACACAGCAATTTATTGTACCGCCGAAAAAAGGGCTCGGCCTGAAGGT 50
BSNT_00551 51 GAAAAAGGGGCAGATTTTAAAGGTGGTTGATGTAGAAGGGCAGCAGGTGG 100
..|.||.|||||||||.||||.||.||.|||||.||||||||||||||||
RBAM_003350__ 51 TCACAAAGGGCAGATTATAAAAGTAGTCGATGTGGAAGGGCAGCAGGTGG 100
BSNT_00551 101 CTGATTTTGTCGCATACCATGCCAAGGATTTTTATGAACACCTTGATCAG 150
||||||||...||.||.|||||||||||.||.|||||.||.|||||||||
RBAM_003350__ 101 CTGATTTTACGGCGTATCATGCCAAGGACTTCTATGAGCATCTTGATCAG 150
BSNT_00551 151 GGAGCGACGATAGACGCCAATCACTCCATTCATGTGAAGGTCAAC----G 196
||.||||||||.||.|||||.||.|||||||||||.|| ||| |
RBAM_003350__ 151 GGCGCGACGATTGATGCCAACCAGTCCATTCATGTAAA----AACGGGTG 196
BSNT_00551 197 ACCATCTCTACTCCAACCTGTATAAGCCGATGTTAACCCTGATTGAAGAT 246
|.|||.|.||.||.||..|.||.|||||||||.|.||.||||||||.|||
RBAM_003350__ 197 ATCATATTTATTCGAATTTATACAAGCCGATGCTGACGCTGATTGAGGAT 246
BSNT_00551 247 ACGGTCGGCAAGCATGATCTGCTGCTGCCCGCCTGCCGTCCTGATATGAA 296
||.||||||||||||||.||||||||.||||||||||||||.||||||||
RBAM_003350__ 247 ACAGTCGGCAAGCATGACCTGCTGCTTCCCGCCTGCCGTCCGGATATGAA 296
BSNT_00551 297 CAGGCTCTTATATGGGAAGCAAAAGGATGAGTTTCAGGATACGTGCTATG 346
||||||.|||||.||.|||||.||.||.|||.|.||||||||||||||||
RBAM_003350__ 297 CAGGCTTTTATACGGAAAGCATAAAGACGAGCTCCAGGATACGTGCTATG 346
BSNT_00551 347 ACAATATGAACCGTGCGCTTGAGCAGTTTGGCGTACCGAAGCCTCACATG 396
|||||||||.|.|.||||||||.|.|||.||.||.|||..|||.||.|||
RBAM_003350__ 347 ACAATATGAGCGGGGCGCTTGAACCGTTCGGGGTGCCGCGGCCGCATATG 396
BSNT_00551 397 CATTACCCATTTGCGATTTTTATGAATACTGTCCTTGATGAGAAAGGGAA 446
||||||||||||||.||.||||||||.||.||.||.||||||||.|||||
RBAM_003350__ 397 CATTACCCATTTGCCATCTTTATGAACACGGTGCTCGATGAGAAGGGGAA 446
BSNT_00551 447 TCTGTCTGTGGAAACGCCGCTTTCGAATGC-------------------- 476
..|.||.||.||||||||.|||||..|.||
RBAM_003350__ 447 CTTATCAGTCGAAACGCCTCTTTCTGACGCGGGTGATTATGTACGGCTCC 496
BSNT_00551 477 ---CGGAGATGGATTTAATTGTCGCGTTTTCTTCCTGCCCGATTGA---- 519
||||.||||||.|..|.||.||||||||.|||||.||||||||
RBAM_003350__ 497 GTGCGGAAATGGATCTCGTCGTGGCGTTTTCATCCTGTCCGATTGAAAAA 546
BSNT_00551 519 -------------------------------------------------- 519
RBAM_003350__ 547 GGAAAATGCAACGGAGACAGCATCACGGCGCTGCGGGTGGAAATCAGCTG 596
BSNT_00551 519 - 519
RBAM_003350__ 597 A 597
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