Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00535 and RBAM_003270

See DNA alignment / Visit BSNT_00535 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:17
# Commandline: needle
#    -asequence pep-align/BSNT_00535.1.9828.seq
#    -bsequence pep-align/RBAM_003270___ycgB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00535-RBAM_003270___ycgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00535-RBAM_003270___ycgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00535
# 2: RBAM_003270___ycgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     122/163 (74.8%)
# Similarity:   139/163 (85.3%)
# Gaps:           1/163 ( 0.6%)
# Score: 642.0
# 
#
#=======================================

BSNT_00535         1 MNNLHNRLSGVNGKNKRVKEKEQKIWSEIGMIAGAFALLDVIIRGIMFEF     50
                     ||...|.||.||||::.|||||:.||||:||:.|..:|||:|:||::...
RBAM_003270__      1 MNQRRNGLSNVNGKSESVKEKERMIWSEVGMLVGTLSLLDIIVRGLVLNC     50

BSNT_00535        51 PFKEWAASLVFLFIIILYYCIRAAASGMLMPRIDTKEELQKRVKQQRIES    100
                     ||:|||.||...||||:||||||.||||||||||||||||||||||||:|
RBAM_003270__     51 PFREWAGSLAVFFIIIVYYCIRAGASGMLMPRIDTKEELQKRVKQQRIDS    100

BSNT_00535       101 IAVAFAVVVLTMYDRGIPHTFFAWLKMILLFIVCGGVLFLLRYVIVKLAY    150
                     |||.|||..:||||||.|||||||||||.|||||||:|||||||||||:|
RBAM_003270__    101 IAVTFAVAAITMYDRGFPHTFFAWLKMIFLFIVCGGILFLLRYVIVKLSY    150

BSNT_00535       151 RRAVKEEIKKKSS    163
                     |||:| |||||||
RBAM_003270__    151 RRAIK-EIKKKSS    162


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