Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00528 and RBAM_003220

See DNA alignment / Visit BSNT_00528 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence pep-align/BSNT_00528___opuAA.1.9828.seq
#    -bsequence pep-align/RBAM_003220___opuAA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00528___opuAA-RBAM_003220___opuAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00528___opuAA-RBAM_003220___opuAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00528___opuAA
# 2: RBAM_003220___opuAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 418
# Identity:     380/418 (90.9%)
# Similarity:   404/418 (96.7%)
# Gaps:           0/418 ( 0.0%)
# Score: 1919.0
# 
#
#=======================================

BSNT_00528___      1 MSVDEKPIKIKVEKVSKIFGKQTKKAVQMLANGKTKKEILKATGSTVGVN     50
                     |::||||||||||.|||:||||||||:|||::||.|||||||||||||||
RBAM_003220__      1 MNLDEKPIKIKVENVSKVFGKQTKKAIQMLSSGKNKKEILKATGSTVGVN     50

BSNT_00528___     51 QADFEVYDGEIFVIMGLSGSGKSTLVRMLNRLIEPTAGNIYIDGDMITNM    100
                     ||:|:||||||||||||||||||||||:||||||||||||||||||||||
RBAM_003220__     51 QANFDVYDGEIFVIMGLSGSGKSTLVRLLNRLIEPTAGNIYIDGDMITNM    100

BSNT_00528___    101 SKDQLREVRRKKISMVFQKFALFPHRTILENTEYGLELQGVDKQERQQKA    150
                     |||||||||||||||||||||||||||||||||||||||||||:||:|||
RBAM_003220__    101 SKDQLREVRRKKISMVFQKFALFPHRTILENTEYGLELQGVDKKEREQKA    150

BSNT_00528___    151 LESLKLVGLEGFEHQYPDQLSGGMQQRVGLARALTNDPDILLMDEAFSAL    200
                     |:|||||||||||||:||||||||||||||||||||||||||||||||||
RBAM_003220__    151 LDSLKLVGLEGFEHQFPDQLSGGMQQRVGLARALTNDPDILLMDEAFSAL    200

BSNT_00528___    201 DPLIRKDMQDELLDLHDNVGKTIIFITHDLDEALRIGDRIVLMKDGNIVQ    250
                     |||||||||||||||||:||||||||||||||||||||||||||||||||
RBAM_003220__    201 DPLIRKDMQDELLDLHDSVGKTIIFITHDLDEALRIGDRIVLMKDGNIVQ    250

BSNT_00528___    251 IGTPEEILMNPSNEYVEKFVEDVDLSKVLTAGHIMKRAETVRIDKGPRVA    300
                     |||||||||:||||||||||||||||||||||||||||||||||||||||
RBAM_003220__    251 IGTPEEILMSPSNEYVEKFVEDVDLSKVLTAGHIMKRAETVRIDKGPRVA    300

BSNT_00528___    301 LTLMKNLGISSIYAVDKQKKLLGVIYASDAKKAAESDLSLQDILNTEFTT    350
                     |.|||||||||||||||||:|||||:|:|||||.||||||||||||||||
RBAM_003220__    301 LQLMKNLGISSIYAVDKQKQLLGVIHAADAKKAVESDLSLQDILNTEFTT    350

BSNT_00528___    351 VPENTYLTEIFDVVSDANIPIAVVDEKQRMKGIVVRGALIGALAGNNEYI    400
                     |.|:|||||||||||||||||||.|:|.|||||||:|||||||:|||:||
RBAM_003220__    351 VHESTYLTEIFDVVSDANIPIAVTDDKDRMKGIVVKGALIGALSGNNDYI    400

BSNT_00528___    401 NAEGTKEQTQDPSAQEVK    418
                     |.|.:.||.||.|.|.||
RBAM_003220__    401 NVEDSAEQAQDSSVQGVK    418


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