Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00528 and RBAM_003220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_00528___opuAA.1.9828.seq
# -bsequence dna-align/RBAM_003220___opuAA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00528___opuAA-RBAM_003220___opuAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00528___opuAA-RBAM_003220___opuAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00528___opuAA
# 2: RBAM_003220___opuAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1260
# Identity: 1048/1260 (83.2%)
# Similarity: 1048/1260 (83.2%)
# Gaps: 6/1260 ( 0.5%)
# Score: 4356.0
#
#
#=======================================
BSNT_00528___ 1 ATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTCTCTAA 50
||||.|.|.|||||||||||||||||||||||||||||.||.||.|||||
RBAM_003220__ 1 ATGAATTTGGATGAGAAACCAATTAAGATAAAAGTCGAAAATGTATCTAA 50
BSNT_00528___ 51 GATTTTTGGGAAACAAACAAAGAAGGCAGTTCAAATGCTTGCCAACGGAA 100
|.||||.||.|||||.|||||.||.||..||||.|||||..|||.|||||
RBAM_003220__ 51 GGTTTTCGGAAAACAGACAAAAAAAGCCATTCAGATGCTGTCCAGCGGAA 100
BSNT_00528___ 101 AGACAAAAAAAGAGATCCTGAAAGCAACCGGATCAACCGTTGGGGTTAAT 150
|.|..||||||||||||||||||||.|||||||||||||||||.||.|||
RBAM_003220__ 101 AAAACAAAAAAGAGATCCTGAAAGCTACCGGATCAACCGTTGGTGTCAAT 150
BSNT_00528___ 151 CAGGCAGATTTTGAAGTATATGATGGTGAGATATTTGTCATCATGGGTCT 200
||.|||.|.|||||.|||||||||||.|||||||||||||||||||||||
RBAM_003220__ 151 CAAGCAAACTTTGATGTATATGATGGGGAGATATTTGTCATCATGGGTCT 200
BSNT_00528___ 201 ATCAGGGAGCGGTAAATCAACTTTAGTACGGATGTTAAACCGGCTTATTG 250
|||.|||||||||||||||||||||||.|||.||||||||||||||||||
RBAM_003220__ 201 ATCGGGGAGCGGTAAATCAACTTTAGTTCGGCTGTTAAACCGGCTTATTG 250
BSNT_00528___ 251 AACCGACTGCCGGAAATATTTACATTGATGGTGACATGATAACAAATATG 300
|||||||||||||.||||||||.|||||||||||||||||||||||||||
RBAM_003220__ 251 AACCGACTGCCGGGAATATTTATATTGATGGTGACATGATAACAAATATG 300
BSNT_00528___ 301 TCTAAAGACCAGCTCCGGGAAGTCCGCCGGAAGAAAATCAGCATGGTCTT 350
||.||||||||||||||||||||.||||||||.|||||||||||||||||
RBAM_003220__ 301 TCAAAAGACCAGCTCCGGGAAGTGCGCCGGAAAAAAATCAGCATGGTCTT 350
BSNT_00528___ 351 CCAAAAGTTCGCTCTGTTCCCGCACAGAACGATACTTGAAAACACAGAAT 400
.|||||.||.||.|||||.||||||||||||||.||||||||.||.||||
RBAM_003220__ 351 TCAAAAATTTGCACTGTTTCCGCACAGAACGATTCTTGAAAATACGGAAT 400
BSNT_00528___ 401 ACGGACTGGAACTTCAAGGTGTAGACAAACAAGAGCGGCAGCAAAAAGCG 450
||||.|||||.||||||||.||.||||||.|||||||..|||||||||||
RBAM_003220__ 401 ACGGCCTGGAGCTTCAAGGCGTCGACAAAAAAGAGCGTGAGCAAAAAGCG 450
BSNT_00528___ 451 CTTGAGTCTCTTAAGCTCGTCGGGCTCGAAGGATTTGAACACCAATATCC 500
|||||.||.|||||.||.|||||.||.|||||.|||||||||||||..||
RBAM_003220__ 451 CTTGATTCGCTTAAACTTGTCGGTCTTGAAGGCTTTGAACACCAATTCCC 500
BSNT_00528___ 501 AGATCAGCTTTCCGGCGGGATGCAGCAGCGTGTCGGCCTTGCCCGCGCGT 550
|||||||||...|||.||.|||||||||||||||||.|||||||||||.|
RBAM_003220__ 501 AGATCAGCTCAGCGGAGGAATGCAGCAGCGTGTCGGACTTGCCCGCGCAT 550
BSNT_00528___ 551 TGACAAATGATCCGGACATCCTTCTGATGGACGAAGCGTTCAGTGCGCTT 600
||||.||||||||.|||||.|||||||||||.|||||.||||||||||||
RBAM_003220__ 551 TGACGAATGATCCTGACATTCTTCTGATGGATGAAGCTTTCAGTGCGCTT 600
BSNT_00528___ 601 GATCCACTGATTCGTAAAGATATGCAGGATGAGCTTCTTGATCTTCACGA 650
|||||.|||||.||.|||||.|||||||||||||||.|.||.|||||.||
RBAM_003220__ 601 GATCCGCTGATCCGCAAAGACATGCAGGATGAGCTTTTAGACCTTCATGA 650
BSNT_00528___ 651 TAATGTCGGAAAAACAATTATCTTTATTACGCATGA-CTTGGACGAAGCG 699
...||||||.||.||.||.|||||.||.|||||||| ||| ||.|||||.
RBAM_003220__ 651 CTCTGTCGGCAAGACGATCATCTTCATCACGCATGATCTT-GATGAAGCA 699
BSNT_00528___ 700 TTGCGGATCGGCGACAGAATTGTCCTAATGAAGGACGGCAACATCGTTCA 749
|||||.||||||||||||||.||.||.|||||.|||||.|||||||||||
RBAM_003220__ 700 TTGCGCATCGGCGACAGAATCGTGCTGATGAAAGACGGTAACATCGTTCA 749
BSNT_00528___ 750 AATCGGCACGCCTGAAGAAATCCTGATGAATCCATCTAACGAATATGTTG 799
.|||||.||||||||||||||.|||||||..||.||.||.|||||.||||
RBAM_003220__ 750 GATCGGGACGCCTGAAGAAATTCTGATGAGCCCGTCCAATGAATACGTTG 799
BSNT_00528___ 800 AGAAATTCGTCGAAGATGTTGATTTGTCTAAAGTCCTCACAGCAGGCCAC 849
||||||||||.||.||.||||||||.||.|||||.||.|||||.||||||
RBAM_003220__ 800 AGAAATTCGTTGAGGACGTTGATTTATCCAAAGTTCTGACAGCGGGCCAC 849
BSNT_00528___ 850 ATTATGAAACGCGCTGAAACAGTGCGGATTGATAAAGGGCCTCGCGTAGC 899
||.|||||.|||||||||||.|||||||||||.|||||||||||.|||||
RBAM_003220__ 850 ATCATGAAGCGCGCTGAAACCGTGCGGATTGACAAAGGGCCTCGTGTAGC 899
BSNT_00528___ 900 ATTGACA-CTGATGAAAAACCTTGGAATTTCTTCAATTTATGCAGTGGAT 948
.||| || ||.|||||.||.||.||.||||||||.|||||.||.||.|||
RBAM_003220__ 900 GTTG-CAGCTCATGAAGAATCTCGGTATTTCTTCTATTTACGCCGTTGAT 948
BSNT_00528___ 949 AAACA-AAAGAAATTGTTAGGTGTTATCTATGCGTCTGATGCGAAAAAAG 997
||||| |||.|..|| .|.||.||.||..|.|||.|.|||||||||||||
RBAM_003220__ 949 AAACAGAAACAGCTT-CTCGGCGTCATTCACGCGGCGGATGCGAAAAAAG 997
BSNT_00528___ 998 CGGCTGAGTCTGATTTGTCACTTCAAGACATCTTGAATACAGAATTTACG 1047
|||..||.||.||.||.||.|||||.||.||.||.|||||.|||||||||
RBAM_003220__ 998 CGGTGGAATCCGACTTATCGCTTCAGGATATTTTAAATACTGAATTTACG 1047
BSNT_00528___ 1048 ACTGTACCAGAGAATACGTATCTGACTGAGATTTTTGACGTTGTGTCTGA 1097
|||||.|..||.|..||.||..||||.||.|||||.||.||.||||||||
RBAM_003220__ 1048 ACTGTGCACGAAAGCACATACTTGACGGAAATTTTCGATGTCGTGTCTGA 1097
BSNT_00528___ 1098 TGCGAATATTCCAATTGCGGTTGTGGATGAGAAGCAAAGAATGAAAGGAA 1147
||||||||||||.||.||.||...|||.||.|||.|..|.||||||||.|
RBAM_003220__ 1098 TGCGAATATTCCGATCGCCGTCACGGACGATAAGGACCGCATGAAAGGCA 1147
BSNT_00528___ 1148 TTGTCGTAAGAGGCGCGCTGATTGGCGCACTTGCCGGCAATAACGAGTAT 1197
|||||||||.||||||..|.||.|||||.|||.|.||.||||||||.|||
RBAM_003220__ 1148 TTGTCGTAAAAGGCGCATTAATCGGCGCGCTTTCAGGAAATAACGATTAT 1197
BSNT_00528___ 1198 ATCAATGCTGAAGGCACTAAAGAACAAACACAAGATCCTTCTGCACAGGA 1247
||.||||.|||||...||...||||||.|.||.|||.||||||..||||.
RBAM_003220__ 1198 ATAAATGTTGAAGATTCTGCTGAACAAGCTCAGGATTCTTCTGTTCAGGG 1247
BSNT_00528___ 1248 GGTGAAGTAA 1257
||||||||||
RBAM_003220__ 1248 GGTGAAGTAA 1257
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