Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00516 and RBAM_003180

See DNA alignment / Visit BSNT_00516 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence pep-align/BSNT_00516___yceF.1.9828.seq
#    -bsequence pep-align/RBAM_003180___yceF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00516___yceF-RBAM_003180___yceF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00516___yceF-RBAM_003180___yceF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00516___yceF
# 2: RBAM_003180___yceF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     236/257 (91.8%)
# Similarity:   248/257 (96.5%)
# Gaps:           0/257 ( 0.0%)
# Score: 1228.0
# 
#
#=======================================

BSNT_00516___      1 MDFLHHILSTYASFFDWKMWGEVLTDPVSWGLIGSLVVLEGLLSADNALV     50
                     |||||||:|||||||||||||||||||||||||||||:||||||||||||
RBAM_003180__      1 MDFLHHIMSTYASFFDWKMWGEVLTDPVSWGLIGSLVLLEGLLSADNALV     50

BSNT_00516___     51 LAVMVKHLPEKQRKKALTYGLFGAYIFRFIFIGLGMLLIKFWWIKVLGAL    100
                     |||||:|||||||||||||||||||||||||||:||||||||||||||||
RBAM_003180__     51 LAVMVRHLPEKQRKKALTYGLFGAYIFRFIFIGIGMLLIKFWWIKVLGAL    100

BSNT_00516___    101 YLAWLVIKHFWIGEKEEEADGIKKNSWMVRTFGIFWATVISVELMDLAFS    150
                     ||||||||||||||.:::.:|:|||||||||||||||||:||||||||||
RBAM_003180__    101 YLAWLVIKHFWIGEGDDDTEGMKKNSWMVRTFGIFWATVVSVELMDLAFS    150

BSNT_00516___    151 VDSILAAFAVSEKVWVLLIGGMLGILMMRTVAKVFLVLIDKIPELENTAF    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_003180__    151 VDSILAAFAVSEKVWVLLIGGMLGILMMRTVAKVFLVLIDKIPELENTAF    200

BSNT_00516___    201 VLIGIIALKMAGSAFHYEMPHSVFFIIIIAAFAVTLIIHYINKQKQVREQ    250
                     |||||||:|||.|||.|||||.|||.||||||.||.||||.||||||:||
RBAM_003180__    201 VLIGIIAVKMAASAFDYEMPHVVFFGIIIAAFVVTFIIHYFNKQKQVQEQ    250

BSNT_00516___    251 TAASKEE    257
                     |||||||
RBAM_003180__    251 TAASKEE    257


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