Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00516 and RBAM_003180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence dna-align/BSNT_00516___yceF.1.9828.seq
# -bsequence dna-align/RBAM_003180___yceF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00516___yceF-RBAM_003180___yceF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00516___yceF-RBAM_003180___yceF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00516___yceF
# 2: RBAM_003180___yceF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 774
# Identity: 642/774 (82.9%)
# Similarity: 642/774 (82.9%)
# Gaps: 0/774 ( 0.0%)
# Score: 2682.0
#
#
#=======================================
BSNT_00516___ 1 TTGGACTTTTTACATCATATTTTGTCTACGTATGCTTCATTTTTCGATTG 50
|||||.|||.|||||||||||.||||.||.||.|||||.|||||.|||||
RBAM_003180__ 1 TTGGATTTTCTACATCATATTATGTCGACCTACGCTTCCTTTTTTGATTG 50
BSNT_00516___ 51 GAAAATGTGGGGGGAAGTTCTGACGGATCCTGTTTCCTGGGGTTTGATCG 100
||||||||||||.||.||.|||||.||.|||||.||.|||||..||||||
RBAM_003180__ 51 GAAAATGTGGGGTGAGGTGCTGACTGACCCTGTATCATGGGGGCTGATCG 100
BSNT_00516___ 101 GTTCCCTTGTTGTTCTGGAAGGCCTTTTATCGGCCGATAACGCGCTTGTT 150
|||||.|.|||.|.||||||||.||..|.||||||||.||.|||.|.||.
RBAM_003180__ 101 GTTCCTTGGTTCTGCTGGAAGGGCTGCTGTCGGCCGACAATGCGTTAGTG 150
BSNT_00516___ 151 CTTGCGGTCATGGTTAAACACCTGCCGGAAAAACAGCGGAAAAAAGCGTT 200
||||||||.|||||.|..||.|||||.||||||||||||||.|||||.||
RBAM_003180__ 151 CTTGCGGTGATGGTAAGGCATCTGCCTGAAAAACAGCGGAAGAAAGCATT 200
BSNT_00516___ 201 AACGTATGGTTTGTTTGGAGCTTATATTTTCAGGTTTATTTTTATCGGGC 250
|||.||.||.|||||.||.||.|||||||||.|.|||||.|||||||||.
RBAM_003180__ 201 AACATACGGATTGTTCGGGGCATATATTTTCCGTTTTATCTTTATCGGGA 250
BSNT_00516___ 251 TCGGTATGCTTCTCATTAAATTCTGGTGGATCAAGGTGCTTGGCGCGCTT 300
||||.|||||.||||||||.||||||||||||||.||||||||||||||.
RBAM_003180__ 251 TCGGAATGCTGCTCATTAAGTTCTGGTGGATCAAAGTGCTTGGCGCGCTG 300
BSNT_00516___ 301 TACCTGGCTTGGCTCGTCATTAAGCACTTCTGGATAGGCGAAAAAGAAGA 350
||||||||||||||||||||||||||.||||||||.||.|||...||.||
RBAM_003180__ 301 TACCTGGCTTGGCTCGTCATTAAGCATTTCTGGATCGGAGAAGGTGATGA 350
BSNT_00516___ 351 GGAAGCGGACGGCATCAAGAAAAACTCTTGGATGGTCCGCACGTTCGGGA 400
.||..||||.|||||.||||||||.||.|||||||||||.||||||||.|
RBAM_003180__ 351 CGATACGGAAGGCATGAAGAAAAATTCATGGATGGTCCGTACGTTCGGAA 400
BSNT_00516___ 401 TCTTCTGGGCGACTGTCATTTCAGTAGAATTAATGGATCTTGCCTTCTCT 450
|.||||||||.||||||.|||||||.||.|||||||||.|.|||||||||
RBAM_003180__ 401 TTTTCTGGGCCACTGTCGTTTCAGTTGAGTTAATGGATTTGGCCTTCTCT 450
BSNT_00516___ 451 GTGGACAGCATCCTGGCCGCGTTTGCAGTATCTGAAAAAGTATGGGTGCT 500
||.||||||||.||||||||||||||.|||||.||||||||.||||||||
RBAM_003180__ 451 GTTGACAGCATTCTGGCCGCGTTTGCGGTATCGGAAAAAGTGTGGGTGCT 500
BSNT_00516___ 501 TCTGATCGGCGGTATGCTTGGTATTTTAATGATGCGTACAGTGGCAAAAG 550
..|||||||||||||||||||.|||.|.||||||||||||||.|||||||
RBAM_003180__ 501 CTTGATCGGCGGTATGCTTGGCATTCTCATGATGCGTACAGTCGCAAAAG 550
BSNT_00516___ 551 TGTTCCTTGTGCTGATTGATAAAATTCCTGAGCTGGAAAACACAGCATTC 600
|.||||||||..|.|||||||||||.||||||||.|||||.||.||.||.
RBAM_003180__ 551 TATTCCTTGTTTTAATTGATAAAATCCCTGAGCTTGAAAATACGGCTTTT 600
BSNT_00516___ 601 GTGTTAATCGGCATTATCGCGCTGAAAATGGCGGGGAGCGCTTTCCATTA 650
|||.|.|||||.||||||||..||||||||||||.||||||.||..||||
RBAM_003180__ 601 GTGCTGATCGGGATTATCGCCGTGAAAATGGCGGCGAGCGCCTTTGATTA 650
BSNT_00516___ 651 CGAAATGCCGCACTCTGTATTCTTCATCATCATTATCGCTGCATTTGCGG 700
.||||||||||||...||.||||||...|||||.||||||||.||||.||
RBAM_003180__ 651 TGAAATGCCGCACGTGGTGTTCTTCGGAATCATCATCGCTGCGTTTGTGG 700
BSNT_00516___ 701 TAACATTGATCATTCACTACATCAATAAACAAAAGCAGGTGCGCGAACAA 750
||||.||.||.||.|||||..||||.||||||||||||||.|..||.|||
RBAM_003180__ 701 TAACGTTTATTATCCACTATTTCAACAAACAAAAGCAGGTTCAGGAGCAA 750
BSNT_00516___ 751 ACAGCCGCTTCAAAAGAAGAATAA 774
||.||.||.||.||||||||||||
RBAM_003180__ 751 ACGGCTGCATCTAAAGAAGAATAA 774
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