Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00514 and RBAM_003160

See DNA alignment / Visit BSNT_00514 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence pep-align/BSNT_00514___yceD.1.9828.seq
#    -bsequence pep-align/RBAM_003160___yceD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00514___yceD-RBAM_003160___yceD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00514___yceD-RBAM_003160___yceD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00514___yceD
# 2: RBAM_003160___yceD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity:     181/193 (93.8%)
# Similarity:   187/193 (96.9%)
# Gaps:           0/193 ( 0.0%)
# Score: 946.0
# 
#
#=======================================

BSNT_00514___      1 MTISLAKGQKVDLTKTNPGLSKVVVGLGWDTNKYDGGHDFDLDSSVFLLD     50
                     |.|||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_003160__      1 MAISLAKGQKVDLTKTNPGLSKVVVGLGWDTNKYDGGHDFDLDSSVFLLN     50

BSNT_00514___     51 AAGKCASPNDFIFYNQLEGGNGSVVHSGDNLTGAGEGDDENVKVNLSAVP    100
                     .|||||||:|||||||||||||||.||||||||.||||||:|:|||||||
RBAM_003160__     51 EAGKCASPDDFIFYNQLEGGNGSVAHSGDNLTGQGEGDDESVRVNLSAVP    100

BSNT_00514___    101 ANIDKISFVITIHDAEARSQNFGQVSNAFVRIVNEETNEELIRYDLAEDF    150
                     |.|||||||||||:||||.|||||||||||||||||||||||||||||||
RBAM_003160__    101 AAIDKISFVITIHEAEARGQNFGQVSNAFVRIVNEETNEELIRYDLAEDF    150

BSNT_00514___    151 SIETAIIAGELYRHNGEWKFSAIGSGYQGGLARIATDYGLQVG    193
                     |||||||||||||||||||||||||||||||||||||||||:|
RBAM_003160__    151 SIETAIIAGELYRHNGEWKFSAIGSGYQGGLARIATDYGLQIG    193


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