Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00514 and RBAM_003160
See
Amino acid alignment /
Visit
BSNT_00514 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence dna-align/BSNT_00514___yceD.1.9828.seq
# -bsequence dna-align/RBAM_003160___yceD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00514___yceD-RBAM_003160___yceD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00514___yceD-RBAM_003160___yceD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00514___yceD
# 2: RBAM_003160___yceD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity: 478/582 (82.1%)
# Similarity: 478/582 (82.1%)
# Gaps: 0/582 ( 0.0%)
# Score: 1974.0
#
#
#=======================================
BSNT_00514___ 1 ATGACAATTTCATTGGCAAAAGGACAAAAAGTAGATTTAACAAAAACAAA 50
|||.||||||||||||||||||||||||||||||||||.||.||||||||
RBAM_003160__ 1 ATGGCAATTTCATTGGCAAAAGGACAAAAAGTAGATTTGACTAAAACAAA 50
BSNT_00514___ 51 TCCGGGTCTTTCAAAGGTTGTTGTCGGTTTAGGCTGGGATACGAACAAGT 100
||||||||||||.||.||.||||||||..|.|||||||||||.|||||.|
RBAM_003160__ 51 TCCGGGTCTTTCTAAAGTCGTTGTCGGCCTTGGCTGGGATACAAACAAAT 100
BSNT_00514___ 101 ATGACGGCGGACACGACTTTGATCTTGACTCAAGTGTGTTTTTGTTAGAC 150
|.|||||||||||.||.||||||.|.||.||.||.||.|||.|.|||.|.
RBAM_003160__ 101 ACGACGGCGGACATGATTTTGATTTAGATTCCAGCGTCTTTCTATTAAAT 150
BSNT_00514___ 151 GCCGCAGGCAAATGCGCGTCACCAAACGACTTTATTTTCTACAACCAGCT 200
|..|||||.|||||||||||.||..|.||.||.||||||||.||.|||||
RBAM_003160__ 151 GAAGCAGGAAAATGCGCGTCGCCCGATGATTTCATTTTCTATAATCAGCT 200
BSNT_00514___ 201 TGAAGGCGGCAACGGTTCAGTCGTTCATTCAGGCGACAACCTGACTGGTG 250
|||||||||.|||||.||.||||..||||||||||||||||||||.||..
RBAM_003160__ 201 TGAAGGCGGAAACGGCTCTGTCGCACATTCAGGCGACAACCTGACAGGCC 250
BSNT_00514___ 251 CTGGCGAAGGCGACGATGAGAATGTAAAAGTAAATCTCAGCGCTGTACCG 300
..|||||||||||.||.||.|..||||.|||.||.||.|||||.||.||.
RBAM_003160__ 251 AGGGCGAAGGCGATGACGAAAGCGTAAGAGTCAACCTGAGCGCGGTGCCC 300
BSNT_00514___ 301 GCAAACATTGATAAAATCTCATTTGTTATTACCATTCACGATGCAGAAGC 350
||....|||||.|||||.|||||.||.||.||.|||||.||.||.|||||
RBAM_003160__ 301 GCGGCTATTGACAAAATTTCATTCGTCATCACGATTCATGAAGCGGAAGC 350
BSNT_00514___ 351 GCGCAGCCAAAACTTTGGACAAGTATCAAACGCGTTTGTCCGCATTGTAA 400
||||.||||||||||.||||||||.||.||||||||.||..|.|||||.|
RBAM_003160__ 351 GCGCGGCCAAAACTTCGGACAAGTTTCCAACGCGTTCGTGAGAATTGTCA 400
BSNT_00514___ 401 ATGAAGAAACAAATGAAGAGCTCATCCGTTACGATCTTGCAGAAGATTTC 450
|||||||.||||||||.|||||.|||||.||.|||||.||.|||||||||
RBAM_003160__ 401 ATGAAGAGACAAATGAGGAGCTGATCCGCTATGATCTGGCTGAAGATTTC 450
BSNT_00514___ 451 TCTATTGAAACGGCAATCATTGCAGGGGAGCTTTACAGACATAACGGCGA 500
||.||||||||.||.||.||.|||||||||||||||||||||||||||||
RBAM_003160__ 451 TCAATTGAAACAGCCATTATCGCAGGGGAGCTTTACAGACATAACGGCGA 500
BSNT_00514___ 501 GTGGAAATTCTCCGCAATCGGCTCAGGCTACCAAGGCGGCCTTGCCCGCA 550
.||||||||.|||||.|||||||||||||||||||||||.||.|||||.|
RBAM_003160__ 501 ATGGAAATTTTCCGCGATCGGCTCAGGCTACCAAGGCGGACTGGCCCGTA 550
BSNT_00514___ 551 TTGCAACAGACTACGGTTTGCAAGTCGGTTAA 582
||||.|||||.|||||..|||||.||||.|.|
RBAM_003160__ 551 TTGCGACAGATTACGGCCTGCAAATCGGCTGA 582
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.