Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00509 and RBAM_003130

See DNA alignment / Visit BSNT_00509 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence pep-align/BSNT_00509___yceA.1.9828.seq
#    -bsequence pep-align/RBAM_003130___yceA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00509___yceA-RBAM_003130___yceA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00509___yceA-RBAM_003130___yceA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00509___yceA
# 2: RBAM_003130___yceA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     248/280 (88.6%)
# Similarity:   260/280 (92.9%)
# Gaps:           1/280 ( 0.4%)
# Score: 1199.0
# 
#
#=======================================

BSNT_00509___      1 MEMFDLEFMRRAFLAGGMIAVMAPILGVYLVLRRQALMADTLSHISLSGV     50
                     ||||||||||||||||.||.:|||||||||||||||||||||||||||||
RBAM_003130__      1 MEMFDLEFMRRAFLAGSMIGIMAPILGVYLVLRRQALMADTLSHISLSGV     50

BSNT_00509___     51 AIGFFLSTNITAASIVVVTIGAIGIEYMRRAYRTYSEVSIAILMAAGLSF    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_003130__     51 AIGFFLSTNITAASIVVVTIGAIGIEYMRRAYRTYSEVSIAILMAAGLSF    100

BSNT_00509___    101 AMFLISLSKGTANMSIDQYLFGSLVTVNQQQVYIISIITLLILLYFIVLR    150
                     ||||||||||.|:||||||||||||||:|||||||..||||||||||:|.
RBAM_003130__    101 AMFLISLSKGGASMSIDQYLFGSLVTVSQQQVYIIGGITLLILLYFIILN    150

BSNT_00509___    151 RPLYLLTFDEATAKTSGINTNVLSLSFSIVTGLAISVIIPIIGVLLVSAL    200
                     |||||||||||||||||||||:||:|||||||||||||||||||||||||
RBAM_003130__    151 RPLYLLTFDEATAKTSGINTNLLSMSFSIVTGLAISVIIPIIGVLLVSAL    200

BSNT_00509___    201 LVLPAAFAIRIAKGFNMVFITAILISLFSVFTGLTSSYQLGTPPGPSITL    250
                     |||||||||||||||..||..||:|||||||.||||||||||||||||||
RBAM_003130__    201 LVLPAAFAIRIAKGFKWVFAAAIIISLFSVFMGLTSSYQLGTPPGPSITL    250

BSNT_00509___    251 LLIVLLLIGFAVQGVWTFIKKEAQRKKRHR    280
                     |||:|||:||.:||:|...||..:||.|. 
RBAM_003130__    251 LLIILLLLGFTLQGIWNAFKKGKERKNRR-    279


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