Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00509 and RBAM_003130

See Amino acid alignment / Visit BSNT_00509 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence dna-align/BSNT_00509___yceA.1.9828.seq
#    -bsequence dna-align/RBAM_003130___yceA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00509___yceA-RBAM_003130___yceA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00509___yceA-RBAM_003130___yceA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00509___yceA
# 2: RBAM_003130___yceA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 852
# Identity:     652/852 (76.5%)
# Similarity:   652/852 (76.5%)
# Gaps:          21/852 ( 2.5%)
# Score: 2457.5
# 
#
#=======================================

BSNT_00509___      1 ATGGAAATGTTTGACTTGGAATTCATGCGACGAGCTTTTCTAGCAGGCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||.||..|
RBAM_003130__      1 ATGGAAATGTTTGACTTGGAATTCATGCGACGAGCTTTTCTAGCGGGAAG     50

BSNT_00509___     51 CATGATCGCCGTCATGGCTCCGATACTAGGAGTGTATCTCGTTCTCAGAA    100
                     ||||||||...|.|||||.||||||.||||.||.||||||||.||.||||
RBAM_003130__     51 CATGATCGGAATTATGGCGCCGATATTAGGCGTATATCTCGTGCTGAGAA    100

BSNT_00509___    101 GACAGGCCTTAATGGCTGACACACTTTCACATATCTCATTGTCAGGTGTT    150
                     |||||||..|.|||||.||.||.||.||.|||||.||||||||.||.||.
RBAM_003130__    101 GACAGGCGCTGATGGCGGATACGCTGTCTCATATTTCATTGTCGGGCGTG    150

BSNT_00509___    151 GCCATCGGCTTTTTTCTCAGCACCAATATAACCGCAGCAAGCATAGTCGT    200
                     ||||||||.|||||||||||.||||||||.||.||.||.|||||.||.||
RBAM_003130__    151 GCCATCGGTTTTTTTCTCAGTACCAATATTACGGCGGCGAGCATCGTTGT    200

BSNT_00509___    201 CGTGACCATCGGCGCGATCGGAATTGAATACATGCGGCGGGCGTATCGGA    250
                     |||.||.|||||.||||||||.||||||||||||||||||||.||.||.|
RBAM_003130__    201 CGTCACGATCGGAGCGATCGGCATTGAATACATGCGGCGGGCATACCGTA    250

BSNT_00509___    251 CTTATTCAGAAGTGTCCATTGCCATCTTAATGGCAGCTGGTTTGTCCTTC    300
                     |.||||||||.||.||.||.||.|||||||||||.||.||..||||.||.
RBAM_003130__    251 CATATTCAGAGGTATCTATCGCAATCTTAATGGCGGCCGGGCTGTCGTTT    300

BSNT_00509___    301 GCGATGTTTTTAATCAGCCTTTCCAAAGGCACAGCCAATATGAGCATTGA    350
                     |||||||||.|.||||||||.||.||||||...||....||||||||.||
RBAM_003130__    301 GCGATGTTTCTGATCAGCCTGTCAAAAGGCGGCGCGTCGATGAGCATCGA    350

BSNT_00509___    351 TCAATACCTATTTGGATCGCTTGTGACAGTAAACCAGCAGCAGGTCTATA    400
                     ||||||..||||||||||||||||.||.||.|.|||||||||||||||||
RBAM_003130__    351 TCAATATTTATTTGGATCGCTTGTCACGGTCAGCCAGCAGCAGGTCTATA    400

BSNT_00509___    401 TTATCAGTATTATCACACTGCTGATCCTGCTTTATTTTATCGTACTGAGA    450
                     |||||.|....||.||.||||||||.|||||||||||.||..||.|.|..
RBAM_003130__    401 TTATCGGAGGCATTACCCTGCTGATTCTGCTTTATTTCATTATATTAAAC    450

BSNT_00509___    451 AGGCCGCTCTACCTGCTGACGTTTGATGAAGCAACAGCCAAAACATCGGG    500
                     ||.||||||||.|||||.||.|||||.||.||.||.||.||.|||||.||
RBAM_003130__    451 AGACCGCTCTATCTGCTTACCTTTGACGAGGCGACGGCGAAGACATCAGG    500

BSNT_00509___    501 AATCAATACAAACGTTCTCTCGTTGTCATTCAGTATTGTCACAGGCCTTG    550
                     .||.||.||||||.|.||.||..||||||||||.||.||.||.||.||.|
RBAM_003130__    501 CATTAACACAAACCTCCTGTCAATGTCATTCAGCATCGTGACGGGGCTGG    550

BSNT_00509___    551 CGATTTCAGTCATTATTCCGATCATCGGGGTCCTTCTTGTATCAGCCCTG    600
                     |||||||.||||||||||||||.|||||.||.||.||.||.||.||.||.
RBAM_003130__    551 CGATTTCGGTCATTATTCCGATTATCGGCGTGCTGCTCGTTTCCGCGCTC    600

BSNT_00509___    601 CTCGTATTGCCGGCAGCATTCGCCATCAGAATTGCAAAAGGCTTTAACAT    650
                     ||||||.||||.||.||.||.||.|||.|.||.||.|||||.||||| ||
RBAM_003130__    601 CTCGTACTGCCCGCGGCTTTTGCAATCCGTATCGCCAAAGGGTTTAA-AT    649

BSNT_00509___    651 G---GTTTTCATTACAGCCATACTCATTTCGTTATTCAGCGTATTTACGG    697
                     |   ||||.|  ..|||||||..|.|||||..|.|||||.||.||.|.||
RBAM_003130__    650 GGGTGTTTGC--GGCAGCCATTATTATTTCTCTTTTCAGTGTGTTCATGG    697

BSNT_00509___    698 GACTGACATCATCCTATCAGCTCGGGACGCCGCCAGGTCCGTCTATTACC    747
                     |.|||||.||.||.||.||||||||.|||||.||.||.|||||.||.||.
RBAM_003130__    698 GGCTGACGTCTTCGTACCAGCTCGGAACGCCTCCGGGGCCGTCAATCACT    747

BSNT_00509___    748 CTGCTATTGATTGTTTTGCTATTAATCGGATTTGCAGTTCAGGGAGTTTG    797
                     .|.||.||.||..||.||||..|..||||.|||.|..|.|||||..||||
RBAM_003130__    748 TTACTGTTAATCATTCTGCTTCTGCTCGGGTTTACGCTGCAGGGGATTTG    797

BSNT_00509___    798 GA---CGTTTATCAA---AAAAGAAGCTCAGCGCAAAAAAAGGCATCGAT    841
                     ||   ||||||..||   |||||||      || ||||||..||  ||.|
RBAM_003130__    798 GAATGCGTTTAAAAAAGGAAAAGAA------CG-AAAAAACCGC--CGTT    838

BSNT_00509___    842 AA    843
                     ||
RBAM_003130__    839 AA    840


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00509 and RBAM_003130

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
