Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00497 and RBAM_003060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:14
# Commandline: needle
# -asequence pep-align/BSNT_00497___ycdC.1.9828.seq
# -bsequence pep-align/RBAM_003060___ycdC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00497___ycdC-RBAM_003060___ycdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00497___ycdC-RBAM_003060___ycdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00497___ycdC
# 2: RBAM_003060___ycdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 500
# Identity: 273/500 (54.6%)
# Similarity: 350/500 (70.0%)
# Gaps: 46/500 ( 9.2%)
# Score: 1458.5
#
#
#=======================================
BSNT_00497___ 1 MKVTERISKNNDNNRKGPFFTLNEERSFYIINRILFVVDSLKGMTSLVNK 50
||.|:.:
RBAM_003060__ 1 -------------------------------------------MTPLLKE 7
BSNT_00497___ 51 QLKKKAQEIGNVPTHYELEIEDYDQKQKKNGQAYFIWKDPKDPEKHITVE 100
.|:|||.||||:|..|||||||||:|||. :||:||||...|:|.:|:|
RBAM_003060__ 8 HLRKKALEIGNIPPDYELEIEDYDEKQKT--KAYYIWKDRNHPDKTVTIE 55
BSNT_00497___ 101 LRNDGALLTFSTTVRSETDKQLPDAELKLTALQFAAVHHPGTFMNFHFQG 150
|.:||:|||:|......:|.||.|||||||||:|||.|.|.|||||.||.
RBAM_003060__ 56 LGDDGSLLTYSRNDCPGSDMQLSDAELKLTALRFAARHRPLTFMNFIFQA 105
BSNT_00497___ 151 KEERGQHIRFVYTKMELGLPIPNSGFLIDMTRSGQVVHFLYYGEGHKAEV 200
:|||...|||:|||..||.|:|:|||.:|:||||.||.|:|||:..:|.|
RBAM_003060__ 106 REERNGCIRFIYTKKVLGRPLPDSGFFVDVTRSGFVVQFIYYGDKGEAPV 155
BSNT_00497___ 201 PTEFVAKEKVVSHYLNTMSFELMYDVIDGEQEPRLVYEPILPGYSYPADV 250
|..||.:|||||||::.::|.|:|||::.|:.||||||||||.|||||..
RBAM_003060__ 156 PETFVDREKVVSHYMSVLTFSLVYDVVNFEKIPRLVYEPILPAYSYPAGE 205
BSNT_00497___ 251 DEIVPDQHIADERIENTAPLPPLQNKEEVDIFALLGFTSDMQKVSERDFG 300
|:|||||.:.::|.|...|||..::|.|:.:..|:||||||.:...||.|
RBAM_003060__ 206 DDIVPDQQLCEDRNEPAKPLPAFEHKREISLDELMGFTSDMVQTRRRDLG 255
BSNT_00497___ 301 EQIGSTWRRGAAPERKDLSIRSYFETRNKNTIKMKTDKRTGKLKAALSFM 350
::||:|||:|:.||||||||.||||:.||||:||||||:|||:.|..||:
RBAM_003060__ 256 DEIGTTWRKGSVPERKDLSIESYFESSNKNTMKMKTDKKTGKMTAFKSFI 305
BSNT_00497___ 351 ERPNNRQCSTEECQEIALQFLYALYPRAAEFFRVNPVRIDERGRVRNHFS 400
|.......|.|||:.:||||||.|||||.|||::||::.|.|||.|.|||
RBAM_003060__ 306 EHQGPAFYSAEECEAVALQFLYKLYPRADEFFKMNPLKTDGRGRFRFHFS 355
BSNT_00497___ 401 VWYKGVPLRFGAARIIVNPETGLIDAFMAPDIEPEQLEAINHRPDVSAEE 450
:|::.:|||||||||:|:|.|||::|:|||||:|||||.||..|.|:.||
RBAM_003060__ 356 IWHQDIPLRFGAARILVSPVTGLVEAYMAPDIDPEQLEKINPVPAVTPEE 405
BSNT_00497___ 451 AREAFLAAFDVKLEWQPDFTAGSDQHYKLVYKPVYPSYIDAHIRKKKRL- 499
|:.|||:.|.::||||.|||...::.|||||:||||.||||..|||||.
RBAM_003060__ 406 AKAAFLSDFHLRLEWQRDFTPSGNEGYKLVYRPVYPPYIDAQKRKKKRFY 455
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