Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00482 and RBAM_003020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:14
# Commandline: needle
# -asequence pep-align/BSNT_00482___yccF.1.9828.seq
# -bsequence pep-align/RBAM_003020___yccF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00482___yccF-RBAM_003020___yccF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00482___yccF-RBAM_003020___yccF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00482___yccF
# 2: RBAM_003020___yccF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 358
# Identity: 273/358 (76.3%)
# Similarity: 308/358 (86.0%)
# Gaps: 2/358 ( 0.6%)
# Score: 1420.5
#
#
#=======================================
BSNT_00482___ 1 MGKVKRNAPCPCGSGKKYKKCCGSKVVDFPAELAAKEAKQIQEDLVEYAF 50
|||||||||||||||||||||||||....||::||||||||||.|:||||
RBAM_003020__ 1 MGKVKRNAPCPCGSGKKYKKCCGSKEAAIPADIAAKEAKQIQESLMEYAF 50
BSNT_00482___ 51 TVHRESISGFINQHDFLSAMDRQTKDISVFNLGIWGIFFHPLAGEKTIFE 100
|.||:.||.|||||.|::.:|||||||.|||||||||||.||||.|||||
RBAM_003020__ 51 TAHRDGISSFINQHAFITELDRQTKDIGVFNLGIWGIFFRPLAGGKTIFE 100
BSNT_00482___ 101 EYLQKKGDSITRPKTREIVESWQSMTPALLLLKDLKEGIIHFEDVITAKQ 150
||||||...|.|||||||||||:|||||:::|:|::||:||||||:|.||
RBAM_003020__ 101 EYLQKKAGGINRPKTREIVESWKSMTPAVMVLEDVREGMIHFEDVMTKKQ 150
BSNT_00482___ 151 FEVEMDASNQDLPPVGSLILGYPIHEAEKAEFFMQFTIFPVKRTEALISK 200
|:||||.|.|||||.||||||||||||||||||||||||||||.||||||
RBAM_003020__ 151 FKVEMDVSQQDLPPAGSLILGYPIHEAEKAEFFMQFTIFPVKRAEALISK 200
BSNT_00482___ 201 VKKYADAAVKDGKTPEDFMKQEFNNVLFALLAEKDEEPKAEKAEVSTVEW 250
|||.|..|:.:||:||.||::.|:.||.|||...:|..:| ||....||
RBAM_003020__ 201 VKKAAAPALAEGKSPERFMQENFDIVLAALLGTAEEPEQA--AEEKQTEW 248
BSNT_00482___ 251 ANDLEKETAAAIEEGMSGEEYPTELIPAVIAIWKTFCEKKSPVIRKPEAF 300
|||:|||||.|||:|:||:|||.||:||||.:|||||.||:|.|||||||
RBAM_003020__ 249 ANDMEKETADAIEKGLSGDEYPAELVPAVIDLWKTFCVKKTPTIRKPEAF 298
BSNT_00482___ 301 AAAVEYYVNAISLNGASVSQAKLAKKYGVSASTISSRYKEIESTLQDEAD 350
|||||||||:||||||||||||||||||||||||||||||||..|.|||:
RBAM_003020__ 299 AAAVEYYVNSISLNGASVSQAKLAKKYGVSASTISSRYKEIEGALTDEAE 348
BSNT_00482___ 351 RFAQALSS 358
|||.||:|
RBAM_003020__ 349 RFAAALTS 356
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