Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00475 and RBAM_002990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence pep-align/BSNT_00475___lmrA.1.9828.seq
# -bsequence pep-align/RBAM_002990___lmrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00475___lmrA-RBAM_002990___lmrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00475___lmrA-RBAM_002990___lmrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00475___lmrA
# 2: RBAM_002990___lmrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 131/188 (69.7%)
# Similarity: 157/188 (83.5%)
# Gaps: 0/188 ( 0.0%)
# Score: 686.0
#
#
#=======================================
BSNT_00475___ 1 MSYGDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGK 50
|||||||||||:|||||||||||||||||||||||||||||||||||.||
RBAM_002990__ 1 MSYGDSREKILAAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPDGK 50
BSNT_00475___ 51 EQLAIEAVNEMKEYIRQKIADCMESYTDPAEGIQAFLKELSCQFSCTEDI 100
|||||||||||..|||.||.:.::::.||||.|||||::||.||:|.|:.
RBAM_002990__ 51 EQLAIEAVNEMSHYIRMKIKESLDAHPDPAESIQAFLQDLSSQFTCPENF 100
BSNT_00475___ 101 EGLPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKLRQTGCSESRAKE 150
||.|||||||||:||||.|::||..||:||.:::..|||..|.|:.:|.|
RBAM_002990__ 101 EGFPVGLLAAETALKSEKLQQACQSAYQEWENLFAGKLRSAGFSDEKAAE 150
BSNT_00475___ 151 ASTVVNAMIEGGILLSLTAKNSTPLLHISSCIPDLLKR 188
.|||:||:|||||::||..|:..|:||||..||:|||.
RBAM_002990__ 151 ISTVLNALIEGGIIVSLAKKDKMPILHISKQIPNLLKT 188
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