Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00474 and RBAM_002980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence pep-align/BSNT_00474___lmrB.1.9828.seq
# -bsequence pep-align/RBAM_002980___lmrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00474___lmrB-RBAM_002980___lmrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00474___lmrB-RBAM_002980___lmrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00474___lmrB
# 2: RBAM_002980___lmrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 478
# Identity: 421/478 (88.1%)
# Similarity: 443/478 (92.7%)
# Gaps: 2/478 ( 0.4%)
# Score: 2134.0
#
#
#=======================================
BSNT_00474___ 1 METTAKASQQYKVMPIMISLLLAGFIGMFSETALNIALTDLMKELNITAA 50
|| .|:.|:||||||||||||.|||||||||||||||||||||||:||.|
RBAM_002980__ 1 ME-NAQPSKQYKVMPIMISLLTAGFIGMFSETALNIALTDLMKELHITPA 49
BSNT_00474___ 51 TVQWLTTGYLLVLGILVPVSGLLLQWFTTRQLFTVSLIFSILGTFIAALA 100
|||||||||||||||||||||||||||||||||.|||.|||:||.|||||
RBAM_002980__ 50 TVQWLTTGYLLVLGILVPVSGLLLQWFTTRQLFIVSLAFSIIGTLIAALA 99
BSNT_00474___ 101 PSFSFLLAARIVQALGTGLLLPLMFNTILVIFPPHKRGAAMGTIGLVIMF 150
|||.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002980__ 100 PSFPFLLAARIVQALGTGLLLPLMFNTILVIFPPHKRGAAMGTIGLVIMF 149
BSNT_00474___ 151 APAIGPTFSGLVLEHLNWHWIFWISLPFLVLALVFGIAYMQNVSETTKPK 200
|||||||||||||||||||||||||||||||||:||||||||||:.||||
RBAM_002980__ 150 APAIGPTFSGLVLEHLNWHWIFWISLPFLVLALLFGIAYMQNVSDITKPK 199
BSNT_00474___ 201 IDVLSIILSTIGFGGIVFGFSNAGEGSGGWSSPTVIVSLIVGVVGLILFS 250
|||||||||||||||||||||||||||.||||||||.||.||.:.|||||
RBAM_002980__ 200 IDVLSIILSTIGFGGIVFGFSNAGEGSDGWSSPTVIGSLTVGAIALILFS 249
BSNT_00474___ 251 IRQLTMKQPMMNLRAFKYPMFILGVIMVFICMMVILSSMLLLPMYLQGGL 300
||||||||||||||||:||||:|||::||||||||||:|||||||||.||
RBAM_002980__ 250 IRQLTMKQPMMNLRAFRYPMFVLGVVIVFICMMVILSTMLLLPMYLQSGL 299
BSNT_00474___ 301 VLTAFASGLVLLPGGILNGFMSPVTGRLFDKYGPKWLVIPGFVIVTVVLW 350
:||||.|||:||||||||||||||||||||||||||||||||||....|.
RBAM_002980__ 300 MLTAFTSGLILLPGGILNGFMSPVTGRLFDKYGPKWLVIPGFVITATALS 349
BSNT_00474___ 351 FFSNVTTASTAVLIIILHTCLMIGISMIMMPAQTNGLNQLPREFYPDGTA 400
||||:..||||:||:.|||||||||||||||||||||||||.||||||||
RBAM_002980__ 350 FFSNINGASTALLIVALHTCLMIGISMIMMPAQTNGLNQLPPEFYPDGTA 399
BSNT_00474___ 401 IMNTLQQMAGAIGTAVAVSIMAAGQHDYMSTVKNPADPAVIPQALTAGVQ 450
|||||||||||||||||||||||||.:||||||||.||:....||.||||
RBAM_002980__ 400 IMNTLQQMAGAIGTAVAVSIMAAGQKNYMSTVKNPNDPSAYSHALIAGVQ 449
BSNT_00474___ 451 HAFVFAMIVAIIGLIGAFFMKRVKVDH- 477
|||:||||||:||||.|||||||||:|
RBAM_002980__ 450 HAFIFAMIVAVIGLISAFFMKRVKVNHS 477
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