Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00472 and RBAM_002970

See DNA alignment / Visit BSNT_00472 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence pep-align/BSNT_00472___ycbU.1.9828.seq
#    -bsequence pep-align/RBAM_002970___ycbU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00472___ycbU-RBAM_002970___ycbU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00472___ycbU-RBAM_002970___ycbU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00472___ycbU
# 2: RBAM_002970___ycbU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 377
# Identity:     224/377 (59.4%)
# Similarity:   286/377 (75.9%)
# Gaps:           9/377 ( 2.4%)
# Score: 1157.0
# 
#
#=======================================

BSNT_00472___      1 MEHLPQQYRHLFPTLQTHTMLASCSQSALAEPVSRAIQDYHDSLLYKGTN     50
                     |.....|||.|||.|:||||||||||||||.|||:|:.||.:|||..|.|
RBAM_002970__      1 MNSPLVQYRSLFPALRTHTMLASCSQSALALPVSKAVNDYQESLLQHGGN     50

BSNT_00472___     51 WKEAIEKTEFARNEFAKLIGAEPDEVAIVPSVSDALVSVASSLTAFGKKH    100
                     |:|||.:||.||.||||||||.|:|:|::|||:.|:.:|.|:|....||.
RBAM_002970__     51 WEEAIGRTERARCEFAKLIGAHPEEIAVLPSVTAAVSAVVSALPDCRKKQ    100

BSNT_00472___    101 VVYTDMDFPAVPHVWQAHSDYTVSVIPSIDGVLPLEQYETHISDETVLTC    150
                     .|||::||||:.|:.:|.::..:||:||.||::|||:|||:||::|:.||
RBAM_002970__    101 AVYTELDFPAIAHILKAQTEMELSVVPSEDGMIPLERYETYISEQTLFTC    150

BSNT_00472___    151 VPHVHYRDGYVQDIKAIAEISQRKGSLLFVDAYQSAGHIPIDVKEWGEEM    200
                     ||||.|..|:|||:|.|||||.:|||||||||||||||||||||:||.:|
RBAM_002970__    151 VPHVSYTSGFVQDMKRIAEISAKKGSLLFVDAYQSAGHIPIDVKDWGVDM    200

BSNT_00472___    201 LAAGTRKYLLGIPGVAFLYVRKELADALKPKASAWFGRENG-----FEGA    245
                     ||||.|||:|||||.||||||||||:.||||.:.|||::..     ...:
RBAM_002970__    201 LAAGARKYMLGIPGTAFLYVRKELAERLKPKVTGWFGQQRASMLDLTRFS    250

BSNT_00472___    246 YAKDARRFQTGTPAFISVYAAAAALSLLNHIGVSHTRDHVKTICADAVQY    295
                     ||..|:||:||||||||:|||.|||||:|..|.......||.:...|.:|
RBAM_002970__    251 YADGAKRFETGTPAFISIYAAQAALSLVNDAGTDRIHREVKKLSTFAYEY    300

BSNT_00472___    296 AAEKGLQLAA-AQGGGQPGMVAIRDERASETAALLKKKKVICAPRDNVIR    344
                     |:||||.|.. .....:|||::||||:|:||||||::|.::|||...:||
RBAM_002970__    301 ASEKGLHLTGPPSADDRPGMISIRDEKAAETAALLRRKNIVCAPSGQIIR    350

BSNT_00472___    345 LAPHFYNTKEDMRRAIDEIA-AKTIHK    370
                     ||||||||.:|:..||||:| |:.|  
RBAM_002970__    351 LAPHFYNTADDLMYAIDELAEARGI--    375


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