Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00472 and RBAM_002970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence pep-align/BSNT_00472___ycbU.1.9828.seq
# -bsequence pep-align/RBAM_002970___ycbU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00472___ycbU-RBAM_002970___ycbU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00472___ycbU-RBAM_002970___ycbU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00472___ycbU
# 2: RBAM_002970___ycbU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 377
# Identity: 224/377 (59.4%)
# Similarity: 286/377 (75.9%)
# Gaps: 9/377 ( 2.4%)
# Score: 1157.0
#
#
#=======================================
BSNT_00472___ 1 MEHLPQQYRHLFPTLQTHTMLASCSQSALAEPVSRAIQDYHDSLLYKGTN 50
|.....|||.|||.|:||||||||||||||.|||:|:.||.:|||..|.|
RBAM_002970__ 1 MNSPLVQYRSLFPALRTHTMLASCSQSALALPVSKAVNDYQESLLQHGGN 50
BSNT_00472___ 51 WKEAIEKTEFARNEFAKLIGAEPDEVAIVPSVSDALVSVASSLTAFGKKH 100
|:|||.:||.||.||||||||.|:|:|::|||:.|:.:|.|:|....||.
RBAM_002970__ 51 WEEAIGRTERARCEFAKLIGAHPEEIAVLPSVTAAVSAVVSALPDCRKKQ 100
BSNT_00472___ 101 VVYTDMDFPAVPHVWQAHSDYTVSVIPSIDGVLPLEQYETHISDETVLTC 150
.|||::||||:.|:.:|.::..:||:||.||::|||:|||:||::|:.||
RBAM_002970__ 101 AVYTELDFPAIAHILKAQTEMELSVVPSEDGMIPLERYETYISEQTLFTC 150
BSNT_00472___ 151 VPHVHYRDGYVQDIKAIAEISQRKGSLLFVDAYQSAGHIPIDVKEWGEEM 200
||||.|..|:|||:|.|||||.:|||||||||||||||||||||:||.:|
RBAM_002970__ 151 VPHVSYTSGFVQDMKRIAEISAKKGSLLFVDAYQSAGHIPIDVKDWGVDM 200
BSNT_00472___ 201 LAAGTRKYLLGIPGVAFLYVRKELADALKPKASAWFGRENG-----FEGA 245
||||.|||:|||||.||||||||||:.||||.:.|||::.. ...:
RBAM_002970__ 201 LAAGARKYMLGIPGTAFLYVRKELAERLKPKVTGWFGQQRASMLDLTRFS 250
BSNT_00472___ 246 YAKDARRFQTGTPAFISVYAAAAALSLLNHIGVSHTRDHVKTICADAVQY 295
||..|:||:||||||||:|||.|||||:|..|.......||.:...|.:|
RBAM_002970__ 251 YADGAKRFETGTPAFISIYAAQAALSLVNDAGTDRIHREVKKLSTFAYEY 300
BSNT_00472___ 296 AAEKGLQLAA-AQGGGQPGMVAIRDERASETAALLKKKKVICAPRDNVIR 344
|:||||.|.. .....:|||::||||:|:||||||::|.::|||...:||
RBAM_002970__ 301 ASEKGLHLTGPPSADDRPGMISIRDEKAAETAALLRRKNIVCAPSGQIIR 350
BSNT_00472___ 345 LAPHFYNTKEDMRRAIDEIA-AKTIHK 370
||||||||.:|:..||||:| |:.|
RBAM_002970__ 351 LAPHFYNTADDLMYAIDELAEARGI-- 375
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