Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00470 and RBAM_002960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence pep-align/BSNT_00470___pcp.1.9828.seq
# -bsequence pep-align/RBAM_002960___pcp.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00470___pcp-RBAM_002960___pcp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00470___pcp-RBAM_002960___pcp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00470___pcp
# 2: RBAM_002960___pcp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 154/215 (71.6%)
# Similarity: 183/215 (85.1%)
# Gaps: 0/215 ( 0.0%)
# Score: 833.0
#
#
#=======================================
BSNT_00470___ 1 MRKKVLITGFDPFDKETVNPSWEAAKRLNGFETEEAIITAEQIPTVFRSA 50
|.||||:||||||..|||||||||.|||||.....|.|.:||:||||..:
RBAM_002960__ 1 MEKKVLLTGFDPFGGETVNPSWEAVKRLNGAAEGPASIVSEQVPTVFYKS 50
BSNT_00470___ 51 LDTLRQAIQKHQPDIVICVGQAGGRMQITPERVAINLADARIPDNEGHQP 100
|..||:||:||||||:|||||||||||||||||||||.:||||||||:||
RBAM_002960__ 51 LAVLREAIKKHQPDIIICVGQAGGRMQITPERVAINLNEARIPDNEGNQP 100
BSNT_00470___ 101 IDEEISPDGPAAYWTGLPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYG 150
:.|.||..||||||||||:||:..::|:.||||||||||||||||:||||
RBAM_002960__ 101 VGENISQGGPAAYWTGLPIKRIVEEIKKEGIPAAVSYTAGTFVCNHLFYG 150
BSNT_00470___ 151 LMDYISRTSPHIRGGFIHIPYIPQQTIDKTAPSLSLDTIVRALRIAAVTA 200
|||.|:|..||||||||||||||:||:.|:|||||||.:.:||:||||||
RBAM_002960__ 151 LMDEITRHHPHIRGGFIHIPYIPEQTLQKSAPSLSLDLVTKALKIAAVTA 200
BSNT_00470___ 201 AQYDEDVKSPGGTLH 215
|.:::|:::.||.||
RBAM_002960__ 201 AAHEDDIETGGGELH 215
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