Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00469 and RBAM_002950

See DNA alignment / Visit BSNT_00469 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence pep-align/BSNT_00469___tatCD.1.9828.seq
#    -bsequence pep-align/RBAM_002950___tatCD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00469___tatCD-RBAM_002950___tatCD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00469___tatCD-RBAM_002950___tatCD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00469___tatCD
# 2: RBAM_002950___tatCD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     181/242 (74.8%)
# Similarity:   212/242 (87.6%)
# Gaps:           1/242 ( 0.4%)
# Score: 956.0
# 
#
#=======================================

BSNT_00469___      1 MDKKETHLIGHLEELRRRIIVTLAAFFLFLITAFLFVQDIYDWLIRDLDG     50
                     ||||||||||||||:|:|:|.|:.||.:|.|.|..||||||||||:||||
RBAM_002950__      1 MDKKETHLIGHLEEVRQRLIKTVIAFLVFFIGACWFVQDIYDWLIKDLDG     50

BSNT_00469___     51 KLAVLGPSEILWVYMMLSGICAIAASIPVAAYQLWRFVAPALTKTERKVT    100
                     :|||||||||||||||::||||:.|:|||||:|||||.|||||..||:..
RBAM_002950__     51 RLAVLGPSEILWVYMMIAGICALTATIPVAAFQLWRFTAPALTPFERRAA    100

BSNT_00469___    101 LMYIPGLFALFLAGISFGYFVLFPIVLSFLTHLSSGHFETMFTADRYFRF    150
                     |:|||||..||:.||||||||||||||.|||.||:|.|:.:||||:||.|
RBAM_002950__    101 LLYIPGLSVLFIIGISFGYFVLFPIVLGFLTQLSAGQFDMVFTADKYFTF    150

BSNT_00469___    151 MVNLSLPFGFLFEMPLVVMFLTRLGILNPYRLAKARKLSYFLLIVVSILI    200
                     |:||:|||||||||||.||||||:||:||.|||||||||||:|||||:||
RBAM_002950__    151 MLNLTLPFGFLFEMPLAVMFLTRIGIVNPTRLAKARKLSYFVLIVVSVLI    200

BSNT_00469___    201 TPPDFISDFLVMIPLLVLFEVSVTLSAFVYKKRLREETAAAA    242
                     |||||:||||||||||||:|:|||||..||:|:..|..:|| 
RBAM_002950__    201 TPPDFMSDFLVMIPLLVLYEISVTLSRIVYRKKWAEAPSAA-    241


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