Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00467 and RBAM_002940

See DNA alignment / Visit BSNT_00467 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence pep-align/BSNT_00467___tatAD.1.9828.seq
#    -bsequence pep-align/RBAM_002940___tatAD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00467___tatAD-RBAM_002940___tatAD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00467___tatAD-RBAM_002940___tatAD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00467___tatAD
# 2: RBAM_002940___tatAD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 70
# Identity:      54/70 (77.1%)
# Similarity:    61/70 (87.1%)
# Gaps:           5/70 ( 7.1%)
# Score: 257.0
# 
#
#=======================================

BSNT_00467___      1 MFSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSG     50
                     |||||||||||||||||||||||||||||||||||||||||||.|:|||.
RBAM_002940__      1 MFSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSAAKTLVSN     50

BSNT_00467___     51 DEKEEKSAELTAVKQDKNAG     70
                     :|.::::||     :||.||
RBAM_002940__     51 EEPDKQTAE-----KDKTAG     65


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.