Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00467 and RBAM_002940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence dna-align/BSNT_00467___tatAD.1.9828.seq
# -bsequence dna-align/RBAM_002940___tatAD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00467___tatAD-RBAM_002940___tatAD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00467___tatAD-RBAM_002940___tatAD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00467___tatAD
# 2: RBAM_002940___tatAD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 159/217 (73.3%)
# Similarity: 159/217 (73.3%)
# Gaps: 23/217 (10.6%)
# Score: 605.5
#
#
#=======================================
BSNT_00467___ 1 ATGTTTTCAAACATTGGAATACCGGGTTTGATTCTGATCTTCGTCATCGC 50
||||||||.||.||.||.||.||.||.|||||.|||||||||||.|||||
RBAM_002940__ 1 ATGTTTTCTAATATCGGCATTCCCGGGTTGATCCTGATCTTCGTTATCGC 50
BSNT_00467___ 51 CCTCATTATTTTTGGCCCTTCCAAGCTGCCGGAAATCGGGCGTGCTGCCG 100
.|||||.|||||.||.|||||.|||||.|||||||||||.|||||.||||
RBAM_002940__ 51 TCTCATCATTTTCGGGCCTTCAAAGCTTCCGGAAATCGGCCGTGCCGCCG 100
BSNT_00467___ 101 GACGGACACTGCTGGAATTTAAAAGCGCCACAAAATCACTTGTGTCTGGT 150
|.||.||.|||||.|||||||||||||||.|||||.||||.||.||
RBAM_002940__ 101 GCCGCACGCTGCTTGAATTTAAAAGCGCCGCAAAAACACTGGTCTC---- 146
BSNT_00467___ 151 GATGAAAAAGAAGAGAAATCAGCTG----AGCTGACAGCGGTAAAGCAGG 196
|||.|||| |||.| |||.|||.||.| ||.|.|
RBAM_002940__ 147 -----AAATGAAG-------AGCCGGACAAGCAGACGGCTG---AGAAAG 181
BSNT_00467___ 197 ACAAAAACGCGGGCTGA 213
||||||..||.||||||
RBAM_002940__ 182 ACAAAACGGCAGGCTGA 198
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