Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00459 and RBAM_002910

See DNA alignment / Visit BSNT_00459 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence pep-align/BSNT_00459___ycbP.1.9828.seq
#    -bsequence pep-align/RBAM_002910___ycbP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00459___ycbP-RBAM_002910___ycbP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00459___ycbP-RBAM_002910___ycbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00459___ycbP
# 2: RBAM_002910___ycbP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      86/128 (67.2%)
# Similarity:   107/128 (83.6%)
# Gaps:           1/128 ( 0.8%)
# Score: 483.0
# 
#
#=======================================

BSNT_00459___      1 MTHVKALAIKGIMTIIVLYLVLGLGFGFTFGDTLLMTIVLGVISYLLGDL     50
                     |.|:||||||||||||:|||:|||||.|||||.||||||||.:||..|||
RBAM_002910__      1 MEHIKALAIKGIMTIIILYLILGLGFRFTFGDVLLMTIVLGAVSYFTGDL     50

BSNT_00459___     51 YVLPRWNNMIATLADFGLAFLVIWLMGMPLSLGMTGGEVALAALFGAIVM    100
                     ||||||||:.|..||||:||||:||||||||:|::||.:|.|||..|:::
RBAM_002910__     51 YVLPRWNNITAASADFGIAFLVVWLMGMPLSMGISGGRLAFAALISAVII    100

BSNT_00459___    101 AIGEYCFHFYMMSKEIGKKHYLETRTDS    128
                     |:|||.||.|:|.|::|...:||.|:: 
RBAM_002910__    101 AVGEYFFHIYLMRKDLGGSRFLEPRSE-    127


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