Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00459 and RBAM_002910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence dna-align/BSNT_00459___ycbP.1.9828.seq
# -bsequence dna-align/RBAM_002910___ycbP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00459___ycbP-RBAM_002910___ycbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00459___ycbP-RBAM_002910___ycbP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00459___ycbP
# 2: RBAM_002910___ycbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 281/395 (71.1%)
# Similarity: 281/395 (71.1%)
# Gaps: 19/395 ( 4.8%)
# Score: 920.5
#
#
#=======================================
BSNT_00459___ 1 ATG--ACACATGTGAAAGCGCTCGCTATTAAAGGTATTATGACGATTATT 48
||| ||||| |.||||||||.||.||||||||.||||||||.||.|||
RBAM_002910__ 1 ATGGAACACA--TTAAAGCGCTTGCCATTAAAGGCATTATGACCATCATT 48
BSNT_00459___ 49 GTGTTGTATCTGGTGCTTGGTCTGGGCTTTGGTTTCACGTTTGGTGATAC 98
.|..||||||||.|.||.||..|.||.|||.|.||.||.||.||.||...
RBAM_002910__ 49 ATTCTGTATCTGATACTCGGCTTAGGTTTTCGCTTTACATTCGGCGACGT 98
BSNT_00459___ 99 GCTGCTAATGACGATTGTGTTAGGGGTTATTTCTTA-TTTGCTGGGCGAT 147
||||||.|||||.||||||.|.||.|...||||||| |||.| ||||||.
RBAM_002910__ 99 GCTGCTGATGACCATTGTGCTGGGAGCCGTTTCTTACTTTAC-GGGCGAC 147
BSNT_00459___ 148 CTTTATGTATTGCCGAGATGGAATAATATGATTGCAACTTTGGCTGATTT 197
||.||.||..|.|||||||||||||||||.|..||..|.|..||||||||
RBAM_002910__ 148 CTGTACGTGCTTCCGAGATGGAATAATATCACGGCGGCATCCGCTGATTT 197
BSNT_00459___ 198 TGGCTTGGCCTTTCTTGTGATCTGGCTGATGGGCATGCCGCTTTCCCTGG 247
.||..|.||.||||||||..|||||||||||||.||||||||.|||.|||
RBAM_002910__ 198 CGGAATCGCGTTTCTTGTTGTCTGGCTGATGGGAATGCCGCTGTCCATGG 247
BSNT_00459___ 248 GGATGACTGGCGGTGAAG--TTGCGTTGGCGGCT-TTATT--CGGCGCAA 292
|.||..|.||.| |||| |.|||||.||.||| ||||| ||.||
RBAM_002910__ 248 GCATTTCCGGAG--GAAGACTGGCGTTTGCCGCTCTTATTTCCGCCG--- 292
BSNT_00459___ 293 TCGTCATGGCAATCGGTGAATATTGCTTCCATTTCTATATGATGAGCAAA 342
||.||||.||..||||.|||||||..||||||.|||||.|||||||.|||
RBAM_002910__ 293 TCATCATCGCCGTCGGAGAATATTTTTTCCATATCTATCTGATGAGAAAA 342
BSNT_00459___ 343 GAGATTGGCAAGAAGCATTATCTTGAAACAAGAACAGACTCATAA 387
||..|.|||..|...|.||.|.|.|||.|..|..|.|| ||||
RBAM_002910__ 343 GACTTGGGCGGGTCCCGTTTTTTAGAACCCCGGTCCGA---ATAA 384
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