Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00947 and RBAM_002900

See DNA alignment / Visit BSNT_00947 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence pep-align/BSNT_00947___ydfQ.1.9828.seq
#    -bsequence pep-align/RBAM_002900___ydfQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00947___ydfQ-RBAM_002900___ydfQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00947___ydfQ-RBAM_002900___ydfQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00947___ydfQ
# 2: RBAM_002900___ydfQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      97/112 (86.6%)
# Similarity:   108/112 (96.4%)
# Gaps:           0/112 ( 0.0%)
# Score: 514.0
# 
#
#=======================================

BSNT_00947___      1 MKEMTELHSLDSIDNFIKQHKFSFIYISRPACTVCHAVLPQLRIVLDQFP     50
                     |||:|:|||||||:||||||:||||||||||||||||||||||.||||||
RBAM_002900__      1 MKELTDLHSLDSIENFIKQHQFSFIYISRPACTVCHAVLPQLRKVLDQFP     50

BSNT_00947___     51 NIKLGHINADDVAEVAGRFSVFTVPMLLLFIDGTEFLREARFVHFKQLEQ    100
                     ||||||||||:|.||||||||||||:|||||||||||||||||||:|||:
RBAM_002900__     51 NIKLGHINADEVEEVAGRFSVFTVPVLLLFIDGTEFLREARFVHFEQLEE    100

BSNT_00947___    101 KLKRVYRLYEGE    112
                     :|||||:||:..
RBAM_002900__    101 RLKRVYQLYQDV    112


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