Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00947 and RBAM_002900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence dna-align/BSNT_00947___ydfQ.1.9828.seq
# -bsequence dna-align/RBAM_002900___ydfQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00947___ydfQ-RBAM_002900___ydfQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00947___ydfQ-RBAM_002900___ydfQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00947___ydfQ
# 2: RBAM_002900___ydfQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity: 301/339 (88.8%)
# Similarity: 301/339 (88.8%)
# Gaps: 0/339 ( 0.0%)
# Score: 1353.0
#
#
#=======================================
BSNT_00947___ 1 ATGAAAGAGATGACAGAATTACATTCATTAGATTCTATAGATAATTTTAT 50
|||||||||.|||||||.||||||||||||||||||||.||.||||||||
RBAM_002900__ 1 ATGAAAGAGCTGACAGACTTACATTCATTAGATTCTATCGAGAATTTTAT 50
BSNT_00947___ 51 CAAACAGCACAAATTCAGTTTTATTTATATATCAAGGCCTGCCTGTACAG 100
.||.|||||..|||||||||||||.||.||.|||||.||.||||||||||
RBAM_002900__ 51 TAAGCAGCATCAATTCAGTTTTATCTACATTTCAAGACCCGCCTGTACAG 100
BSNT_00947___ 101 TATGTCACGCAGTCCTGCCCCAGCTCAGAATAGTATTGGATCAGTTTCCA 150
||||||||||.||.|||||.||||||||||.||||||||||||||||||.
RBAM_002900__ 101 TATGTCACGCTGTTCTGCCGCAGCTCAGAAAAGTATTGGATCAGTTTCCG 150
BSNT_00947___ 151 AACATCAAATTGGGGCATATCAATGCTGACGATGTAGCAGAGGTCGCTGG 200
||.|||||||||||||||||||||||||||||.||||.||||||.||.||
RBAM_002900__ 151 AATATCAAATTGGGGCATATCAATGCTGACGAGGTAGAAGAGGTGGCCGG 200
BSNT_00947___ 201 CAGATTTTCAGTTTTCACCGTTCCTATGCTTCTTTTGTTCATTGATGGGA 250
||||||||||||.|||||.|||||..||||||||||||||||||||||||
RBAM_002900__ 201 CAGATTTTCAGTCTTCACTGTTCCCGTGCTTCTTTTGTTCATTGATGGGA 250
BSNT_00947___ 251 CTGAGTTTCTAAGAGAAGCCCGTTTTGTTCATTTTAAACAGCTTGAACAA 300
||||||||||.|||||||||||.||||||||||||.|||||||.|||.||
RBAM_002900__ 251 CTGAGTTTCTGAGAGAAGCCCGCTTTGTTCATTTTGAACAGCTCGAAGAA 300
BSNT_00947___ 301 AAGCTGAAAAGGGTTTATCGATTATATGAAGGTGAATAA 339
|.|||||||||||||||||..||||||.|||.||.||||
RBAM_002900__ 301 AGGCTGAAAAGGGTTTATCAGTTATATCAAGATGTATAA 339
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