Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00946 and RBAM_002890

See DNA alignment / Visit BSNT_00946 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence pep-align/BSNT_00946___ydfP.1.9828.seq
#    -bsequence pep-align/RBAM_002890___ydfP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00946___ydfP-RBAM_002890___ydfP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00946___ydfP-RBAM_002890___ydfP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00946___ydfP
# 2: RBAM_002890___ydfP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 129
# Identity:     126/129 (97.7%)
# Similarity:   127/129 (98.4%)
# Gaps:           0/129 ( 0.0%)
# Score: 640.0
# 
#
#=======================================

BSNT_00946___      1 MEDAGLLLIRIMIGVVFLFYGTQKLFGWFGGYGIKGTGQWFESIGVKPGN     50
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
RBAM_002890__      1 MEDAGLLLIRIMIGVVFLFYGSQKLFGWFGGYGIKGTGQWFESIGVKPGN     50

BSNT_00946___     51 VAAALSGLGELVSGILFILGVFLPLGAAIITIIMLGAIVKVHGAKGFANG    100
                     .||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_002890__     51 AAAALSGLGELASGILFILGVFLPLGAAIITIIMLGAIVKVHGAKGFANG    100

BSNT_00946___    101 AGGFEYNLVLIAVSIGVALIGSGAYALHF    129
                     |||||||||||||||||||||||||||||
RBAM_002890__    101 AGGFEYNLVLIAVSIGVALIGSGAYALHF    129


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