Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00946 and RBAM_002890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence dna-align/BSNT_00946___ydfP.1.9828.seq
# -bsequence dna-align/RBAM_002890___ydfP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00946___ydfP-RBAM_002890___ydfP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00946___ydfP-RBAM_002890___ydfP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00946___ydfP
# 2: RBAM_002890___ydfP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 390
# Identity: 353/390 (90.5%)
# Similarity: 353/390 (90.5%)
# Gaps: 0/390 ( 0.0%)
# Score: 1617.0
#
#
#=======================================
BSNT_00946___ 1 ATGGAAGATGCAGGACTGTTGCTTATTCGTATAATGATTGGTGTAGTGTT 50
|||||||||||||||||.||.||||||||.||.|||||||||||.|||||
RBAM_002890__ 1 ATGGAAGATGCAGGACTATTACTTATTCGAATCATGATTGGTGTGGTGTT 50
BSNT_00946___ 51 TTTGTTTTATGGCACACAAAAATTATTCGGCTGGTTTGGCGGATACGGGA 100
|.||||||||||..||||||||||||||||||||||||||||||||||.|
RBAM_002890__ 51 TCTGTTTTATGGATCACAAAAATTATTCGGCTGGTTTGGCGGATACGGAA 100
BSNT_00946___ 101 TTAAAGGAACCGGACAATGGTTCGAATCAATTGGGGTGAAACCAGGAAAC 150
|||||||||||||||||||||||||.||||||||.||.||||||||.||.
RBAM_002890__ 101 TTAAAGGAACCGGACAATGGTTCGAGTCAATTGGAGTTAAACCAGGCAAT 150
BSNT_00946___ 151 GTTGCGGCCGCTCTATCAGGTCTTGGGGAGTTAGTAAGCGGAATTCTATT 200
|..|||||||||.||||||||||.|||||..|.|.|||||||||||||||
RBAM_002890__ 151 GCCGCGGCCGCTTTATCAGGTCTCGGGGAACTCGCAAGCGGAATTCTATT 200
BSNT_00946___ 201 TATTTTAGGCGTATTCCTCCCGCTTGGAGCTGCTATCATAACGATCATCA 250
|||||||||.||||||||||||||||||||||||||||||||||||||.|
RBAM_002890__ 201 TATTTTAGGTGTATTCCTCCCGCTTGGAGCTGCTATCATAACGATCATTA 250
BSNT_00946___ 251 TGTTAGGTGCTATCGTAAAAGTCCATGGAGCGAAAGGTTTTGCGAATGGC 300
||||||||||.||.|||||||||||||||||||||||.||||||||.||.
RBAM_002890__ 251 TGTTAGGTGCCATTGTAAAAGTCCATGGAGCGAAAGGGTTTGCGAACGGT 300
BSNT_00946___ 301 GCCGGAGGTTTTGAATATAACCTGGTGCTCATTGCAGTTTCCATAGGGGT 350
|||||.|||||||||||||||.|||||||.||||||||.|||||.||.||
RBAM_002890__ 301 GCCGGCGGTTTTGAATATAACTTGGTGCTGATTGCAGTCTCCATCGGAGT 350
BSNT_00946___ 351 TGCACTCATCGGTTCAGGAGCTTACGCTTTGCATTTTTAA 390
||||||||||||||||||.||.||||||||||||||||||
RBAM_002890__ 351 TGCACTCATCGGTTCAGGGGCGTACGCTTTGCATTTTTAA 390
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