Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00945 and RBAM_002880
See
DNA alignment /
Visit
BSNT_00945 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence pep-align/BSNT_00945___ydfO.1.9828.seq
# -bsequence pep-align/RBAM_002880___ydfO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00945___ydfO-RBAM_002880___ydfO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00945___ydfO-RBAM_002880___ydfO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00945___ydfO
# 2: RBAM_002880___ydfO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity: 291/312 (93.3%)
# Similarity: 303/312 (97.1%)
# Gaps: 0/312 ( 0.0%)
# Score: 1598.0
#
#
#=======================================
BSNT_00945___ 1 MAKKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYF 50
|||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_002880__ 1 MAKKTMGIHHITAIVGHPQENADFYAGVLGLRLVKQTVNFDDPGTYHLYF 50
BSNT_00945___ 51 GNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEK 100
|:||||||||||||||||||||:|||||||||||.|||||||||||||||
RBAM_002880__ 51 GDEGGKPGTIITFFPWAGARQGIIGDGQVGVTSYAVPKGAMAFWEKRLEK 100
BSNT_00945___ 101 FNVPYTKIERFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGDVTPDVAI 150
||:||||||||||||:||||||||||||||||.|||||||||||||||||
RBAM_002880__ 101 FNIPYTKIERFGEQYIEFDDPHGLHLEIVEREAGEANTWTFGDVTPDVAI 150
BSNT_00945___ 151 KGFGGATLLSAQPDKTAELLENIMGLERVGKEGDFVRYRSAGDIGNVIDL 200
|||||||||||||:||.:||||||||||||||||||||||||||||||||
RBAM_002880__ 151 KGFGGATLLSAQPEKTGKLLENIMGLERVGKEGDFVRYRSAGDIGNVIDL 200
BSNT_00945___ 201 KLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPVRDRNY 250
|||||||||||.||||||||||.||||||||||:||:||||||||:||||
RBAM_002880__ 201 KLTPIGRGQMGVGTVHHIAWRAQDDEDQLDWQRFIAAHGYGVTPVQDRNY 250
BSNT_00945___ 251 FNAIYFREHGEILFEIATDPPGFAHDETQDTMGEKLMLPVQYEPHRTQIE 300
|||:|||||||||||||||||||||||:|:|||.|||||.||||||.|||
RBAM_002880__ 251 FNAVYFREHGEILFEIATDPPGFAHDESQETMGGKLMLPEQYEPHRAQIE 300
BSNT_00945___ 301 QGLLPFEVRELD 312
||||||||||||
RBAM_002880__ 301 QGLLPFEVRELD 312
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.