Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00942 and RBAM_002860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence pep-align/BSNT_00942___ydfM.1.9828.seq
# -bsequence pep-align/RBAM_002860___ydfM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00942___ydfM-RBAM_002860___ydfM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00942___ydfM-RBAM_002860___ydfM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00942___ydfM
# 2: RBAM_002860___ydfM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity: 277/297 (93.3%)
# Similarity: 288/297 (97.0%)
# Gaps: 0/297 ( 0.0%)
# Score: 1394.0
#
#
#=======================================
BSNT_00942___ 1 MASEREQISRKVALIALIANLILMAGKVFFGLVGDSEAVFADGIHSAADV 50
|.|||||||:|||||||||||||||||:||||:|||||||||||||||||
RBAM_002860__ 1 MTSEREQISKKVALIALIANLILMAGKIFFGLIGDSEAVFADGIHSAADV 50
BSNT_00942___ 51 VASIAVLAVIGISNKPPDQDHPFGHGKAEVISEAIVGIILVIVSVYILIE 100
|||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_002860__ 51 VASIAVLAVIGISNKPPDQDHPFGHGKAEVISEAIVGIILVLVSVYILIE 100
BSNT_00942___ 101 AILSFVKGPSVPQYSALFAALISYVAKEILYRYSIKQGEKWNSKAIIAIA 150
||.|||:|||:|||||||||||||.||:||||||||||||||||||||||
RBAM_002860__ 101 AISSFVEGPSIPQYSALFAALISYAAKQILYRYSIKQGEKWNSKAIIAIA 150
BSNT_00942___ 151 YDHKGDIVASLAAFIGVLLAIIGNTRGWPYLLYADAIASAIVAYLIFKIS 200
||||||||||||||||||||||||||||.||||||||||.||||||||||
RBAM_002860__ 151 YDHKGDIVASLAAFIGVLLAIIGNTRGWSYLLYADAIASVIVAYLIFKIS 200
BSNT_00942___ 201 MELIRPSVDVLMEKSVDPELIEEYKAVIFQCDQVKRIDRIRAREHGHYKL 250
||||:|||||||||||||||||||||||..|.||||:|:|||||||||||
RBAM_002860__ 201 MELIKPSVDVLMEKSVDPELIEEYKAVILHCPQVKRLDKIRAREHGHYKL 250
BSNT_00942___ 251 LDVRLSLDHDLTIKQGHDIAREIRNEIKRQFSDVEEVLIHVNPYFEE 297
|||||||||||||||||||||||||||:|.|||||||||||||||||
RBAM_002860__ 251 LDVRLSLDHDLTIKQGHDIAREIRNEIQRHFSDVEEVLIHVNPYFEE 297
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