Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00942 and RBAM_002860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence dna-align/BSNT_00942___ydfM.1.9828.seq
# -bsequence dna-align/RBAM_002860___ydfM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00942___ydfM-RBAM_002860___ydfM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00942___ydfM-RBAM_002860___ydfM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00942___ydfM
# 2: RBAM_002860___ydfM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity: 797/894 (89.1%)
# Similarity: 797/894 (89.1%)
# Gaps: 0/894 ( 0.0%)
# Score: 3597.0
#
#
#=======================================
BSNT_00942___ 1 ATGGCAAGTGAAAGAGAACAAATAAGCAGAAAAGTTGCTTTGATAGCATT 50
|||.||||||||||||||||||||||||.|||||||||||||||.|||||
RBAM_002860__ 1 ATGACAAGTGAAAGAGAACAAATAAGCAAAAAAGTTGCTTTGATTGCATT 50
BSNT_00942___ 51 GATCGCCAATCTCATCTTAATGGCAGGAAAGGTCTTTTTTGGGCTGGTAG 100
|||.||||||||.||||||||||||||||||.||||||||||.|||.|||
RBAM_002860__ 51 GATAGCCAATCTGATCTTAATGGCAGGAAAGATCTTTTTTGGACTGATAG 100
BSNT_00942___ 101 GCGATAGTGAAGCCGTGTTTGCAGACGGAATACATTCCGCGGCAGATGTC 150
|||||||||||||.||.|||||.|||||.||||||||.||.||.||||||
RBAM_002860__ 101 GCGATAGTGAAGCAGTTTTTGCCGACGGTATACATTCTGCAGCGGATGTC 150
BSNT_00942___ 151 GTTGCTTCGATTGCAGTCTTGGCAGTGATCGGAATTTCCAATAAACCGCC 200
||.|||||.|||||.|||.||||.||.|||||.|||||.|||||.|||||
RBAM_002860__ 151 GTGGCTTCAATTGCTGTCCTGGCCGTCATCGGCATTTCTAATAAGCCGCC 200
BSNT_00942___ 201 CGATCAAGACCATCCTTTTGGTCACGGAAAAGCTGAAGTCATTAGTGAGG 250
|||||||||||||||||||||.||.||.||||||||.|||||.||.||.|
RBAM_002860__ 201 CGATCAAGACCATCCTTTTGGGCATGGCAAAGCTGAGGTCATCAGCGAAG 250
BSNT_00942___ 251 CGATTGTAGGAATTATCTTAGTGATCGTATCCGTTTATATCCTCATAGAA 300
|||||||||||||.||.||||||.||||.|||||.|||||.||.||||||
RBAM_002860__ 251 CGATTGTAGGAATCATATTAGTGCTCGTTTCCGTGTATATTCTGATAGAA 300
BSNT_00942___ 301 GCGATTCTGTCCTTTGTTAAAGGGCCAAGCGTTCCCCAATACAGCGCATT 350
||||||..||||||||||.||||.||||||.|.||.||||||||||||||
RBAM_002860__ 301 GCGATTTCGTCCTTTGTTGAAGGTCCAAGCATCCCGCAATACAGCGCATT 350
BSNT_00942___ 351 GTTTGCGGCTCTGATTTCGTACGTGGCTAAGGAAATCTTATATCGTTATT 400
|||||||||||||||.||.||||.|||||||.|.||||||||||||||||
RBAM_002860__ 351 GTTTGCGGCTCTGATATCCTACGCGGCTAAGCAGATCTTATATCGTTATT 400
BSNT_00942___ 401 CTATAAAGCAAGGGGAAAAATGGAACAGCAAAGCGATTATAGCGATTGCG 450
|.||.||.||||||||||||||||||||.||||||||||||||||||||.
RBAM_002860__ 401 CGATCAAACAAGGGGAAAAATGGAACAGTAAAGCGATTATAGCGATTGCA 450
BSNT_00942___ 451 TACGATCATAAAGGCGATATCGTTGCCTCTCTTGCCGCTTTTATCGGCGT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002860__ 451 TACGATCATAAAGGCGATATCGTTGCCTCTCTTGCCGCTTTTATCGGCGT 500
BSNT_00942___ 501 CCTGTTGGCTATCATCGGGAACACCCGCGGATGGCCCTATCTGTTGTACG 550
|||.|||||.||.|||||||||||.|||||||||.|||||||||||||||
RBAM_002860__ 501 CCTATTGGCGATTATCGGGAACACACGCGGATGGTCCTATCTGTTGTACG 550
BSNT_00942___ 551 CCGATGCCATTGCCAGTGCAATCGTTGCTTACCTCATTTTTAAGATTTCA 600
|||||||.||||||||||..|||||.||.|||||.|||||||||||||||
RBAM_002860__ 551 CCGATGCAATTGCCAGTGTCATCGTGGCGTACCTTATTTTTAAGATTTCA 600
BSNT_00942___ 601 ATGGAATTAATCAGGCCGTCTGTTGATGTGCTCATGGAAAAGAGTGTTGA 650
|||||||||||||.||||||||||||.||.|||||||||||.||||||||
RBAM_002860__ 601 ATGGAATTAATCAAGCCGTCTGTTGACGTTCTCATGGAAAAAAGTGTTGA 650
BSNT_00942___ 651 TCCCGAGCTGATAGAGGAATATAAAGCTGTTATTTTTCAATGTGATCAAG 700
||||||.||||||||||||||||||||.||||||||.||.||...|||||
RBAM_002860__ 651 TCCCGAACTGATAGAGGAATATAAAGCCGTTATTTTGCATTGCCCTCAAG 700
BSNT_00942___ 701 TAAAACGAATTGATAGAATCCGCGCGCGAGAACATGGCCACTATAAATTG 750
|.|||||..|.||||.||||||.||..|||||||.|||||||||||||||
RBAM_002860__ 701 TCAAACGGCTCGATAAAATCCGAGCAAGAGAACACGGCCACTATAAATTG 750
BSNT_00942___ 751 CTTGATGTCCGTTTATCTTTGGATCATGATTTGACAATTAAGCAGGGACA 800
|||||||||||.|||||||||||||||||||||||.||||||||||||||
RBAM_002860__ 751 CTTGATGTCCGGTTATCTTTGGATCATGATTTGACGATTAAGCAGGGACA 800
BSNT_00942___ 801 CGACATCGCCCGCGAAATTCGAAATGAAATCAAAAGACAGTTTTCAGATG 850
|||.||.|||||||||||.||||||||||||.|||||||.||||||||||
RBAM_002860__ 801 CGATATTGCCCGCGAAATCCGAAATGAAATCCAAAGACACTTTTCAGATG 850
BSNT_00942___ 851 TAGAAGAAGTGCTCATCCATGTAAATCCTTATTTCGAAGAATGA 894
|.|||||||||||||||||.||.|||||||||||.|||||||||
RBAM_002860__ 851 TTGAAGAAGTGCTCATCCACGTGAATCCTTATTTTGAAGAATGA 894
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