Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00432 and RBAM_002810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:11
# Commandline: needle
# -asequence pep-align/BSNT_00432.1.9828.seq
# -bsequence pep-align/RBAM_002810___ycbA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00432-RBAM_002810___ycbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00432-RBAM_002810___ycbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00432
# 2: RBAM_002810___ycbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity: 285/453 (62.9%)
# Similarity: 336/453 (74.2%)
# Gaps: 43/453 ( 9.5%)
# Score: 1506.0
#
#
#=======================================
BSNT_00432 1 MFWVKSNLQVFSRFPKIKSEDVINIKLERFIEKDGYILALMLITVPLAGE 50
||||||||||
RBAM_002810__ 1 ----------------------------------------MLITVPLAGE 10
BSNT_00432 51 LKFYPLNEEFRVSFGAPVFFFFLSLLRHVPAVLPGFLTGAAVFIFRVFLE 100
||||||||.:|:|||||.|||||.|||||||||.|.||||||..||:.||
RBAM_002810__ 11 LKFYPLNEVYRISFGAPAFFFFLLLLRHVPAVLSGLLTGAAVVAFRIGLE 60
BSNT_00432 101 LWGGGHNGLTPILYDQASGFFFYMTYACLFSILKANRFRERPIMLGFIGF 150
.|||.|.|.|...:.|...||||.||||||.:||...|.:||:|:||:||
RBAM_002810__ 61 CWGGEHAGFTEAFFSQYPSFFFYFTYACLFYVLKVRLFWDRPLMIGFLGF 110
BSNT_00432 151 MIEVVSDCVELAVQFLIFHTVVTPEKITDIAVIAISHTFIVMSFYSVLKL 200
:||:.||.||:.|||.....::.|:|:.||||||:||||||:||::|:||
RBAM_002810__ 111 LIEIASDAVEMTVQFSGGRQIMMPDKLADIAVIAVSHTFIVLSFFNVMKL 160
BSNT_00432 201 YETQSREKQTRQQHEHMLMIVSNLYEETVHLKKTLKTTEKVTNDSYQFYR 250
:|:|.||||||:||||||||||||||||:||||||||||.||.:|||.||
RBAM_002810__ 161 HESQVREKQTRKQHEHMLMIVSNLYEETIHLKKTLKTTEHVTKESYQLYR 210
BSNT_00432 251 EMKGKDVQLSGRILRLAGEIHEVKKDNQRIFAGLSKLISNESLRDYMRAS 300
||.|.|.:|..|:||||||||||||||||||||||||||||..||||.|:
RBAM_002810__ 211 EMSGNDRELGSRMLRLAGEIHEVKKDNQRIFAGLSKLISNERFRDYMNAA 260
BSNT_00432 301 DLLQLVIRMNEKYAEALGKQIDFYCSIEGEHDEYHVFIVLSIINNLTANA 350
.|:.:|||:||||||:|||.|.|...|||||.:||||.||||:|||||||
RBAM_002810__ 261 ALVGIVIRINEKYAESLGKDIQFRSVIEGEHPDYHVFTVLSILNNLTANA 310
BSNT_00432 351 VEAMDEEGMVSLRLRKPNESMVEFQVEDNGPGISEKIGDIVFDPGFTSKY 400
||||.:.|.:.|.||:......|||.||:||||.||||::|:||||||||
RBAM_002810__ 311 VEAMGDRGEIRLALRRAEGEKAEFQAEDDGPGIPEKIGEVVYDPGFTSKY 360
BSNT_00432 401 DEFGTPSTGIGLSYVKEIVTELEGDITFDNQQRGVVFAIRLPVRHLIQKG 450
||||||||||||:|||||||||:|||:|.|:.:||:|.|:|||:|||.:.
RBAM_002810__ 361 DEFGTPSTGIGLTYVKEIVTELDGDISFHNKPKGVIFTIKLPVKHLIAER 410
BSNT_00432 450 --- 450
RBAM_002810__ 411 MNS 413
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