Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00431 and RBAM_002800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:11
# Commandline: needle
# -asequence pep-align/BSNT_00431___ybgJ.1.9828.seq
# -bsequence pep-align/RBAM_002800___ybgJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00431___ybgJ-RBAM_002800___ybgJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00431___ybgJ-RBAM_002800___ybgJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00431___ybgJ
# 2: RBAM_002800___ybgJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity: 283/327 (86.5%)
# Similarity: 310/327 (94.8%)
# Gaps: 0/327 ( 0.0%)
# Score: 1512.0
#
#
#=======================================
BSNT_00431___ 1 MKELIKEHQKDINPALQLHDWVEYYRPFAANGQSANYIPALGKVNDSQLG 50
||::::|..:....|..|.||||:||||:.||:|||||||||::||||||
RBAM_002800__ 1 MKDMVRERLEKEELASLLQDWVEHYRPFSVNGKSANYIPALGEINDSQLG 50
BSNT_00431___ 51 ICVLEPDGTMIHAGDWNVSFTLQSISKVISFIAACMSRGIPYVLDRVDVE 100
||:|||||:|||||:|||.|||||||||||||||||:|||.|||||||||
RBAM_002800__ 51 ICILEPDGSMIHAGEWNVPFTLQSISKVISFIAACMNRGISYVLDRVDVE 100
BSNT_00431___ 101 PTGDAFNSIIRLEINKPGKPFNPMINAGALTIASILPGESAYEKLEFLYS 150
||||||||||||||:||||||||||||||:|:||:||||:|::|||:|:|
RBAM_002800__ 101 PTGDAFNSIIRLEIHKPGKPFNPMINAGAITVASLLPGETAHDKLEYLFS 150
BSNT_00431___ 151 VMETLIGKRPRIHEEVFRSEWETAHRNRALAYYLKETNFLEAEVEETLEV 200
|.|.||||||.||||||||||:||||||||||||||||||||:|||||||
RBAM_002800__ 151 VFEKLIGKRPHIHEEVFRSEWQTAHRNRALAYYLKETNFLEADVEETLEV 200
BSNT_00431___ 201 YLKQCAMESTTEDIALIGLILAHDGYHPIRREQVIPKDVAKLAKALMLTC 250
||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_002800__ 201 YLKQCAMEGTTEDIALIGLILAHDGYHPIRREQVIPKDVAKLAKALMLTC 250
BSNT_00431___ 251 GMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFQSGCGIGIYGP 300
|||||||||||||||||||||||||||||||||||||||.:|||||||||
RBAM_002800__ 251 GMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFHNGCGIGIYGP 300
BSNT_00431___ 301 AIDEYGNSLTGGMLLKHMAQEWELSIF 327
|||||||||||||||||:|||||||||
RBAM_002800__ 301 AIDEYGNSLTGGMLLKHIAQEWELSIF 327
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