Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00431 and RBAM_002800

See DNA alignment / Visit BSNT_00431 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence pep-align/BSNT_00431___ybgJ.1.9828.seq
#    -bsequence pep-align/RBAM_002800___ybgJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00431___ybgJ-RBAM_002800___ybgJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00431___ybgJ-RBAM_002800___ybgJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00431___ybgJ
# 2: RBAM_002800___ybgJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     283/327 (86.5%)
# Similarity:   310/327 (94.8%)
# Gaps:           0/327 ( 0.0%)
# Score: 1512.0
# 
#
#=======================================

BSNT_00431___      1 MKELIKEHQKDINPALQLHDWVEYYRPFAANGQSANYIPALGKVNDSQLG     50
                     ||::::|..:....|..|.||||:||||:.||:|||||||||::||||||
RBAM_002800__      1 MKDMVRERLEKEELASLLQDWVEHYRPFSVNGKSANYIPALGEINDSQLG     50

BSNT_00431___     51 ICVLEPDGTMIHAGDWNVSFTLQSISKVISFIAACMSRGIPYVLDRVDVE    100
                     ||:|||||:|||||:|||.|||||||||||||||||:|||.|||||||||
RBAM_002800__     51 ICILEPDGSMIHAGEWNVPFTLQSISKVISFIAACMNRGISYVLDRVDVE    100

BSNT_00431___    101 PTGDAFNSIIRLEINKPGKPFNPMINAGALTIASILPGESAYEKLEFLYS    150
                     ||||||||||||||:||||||||||||||:|:||:||||:|::|||:|:|
RBAM_002800__    101 PTGDAFNSIIRLEIHKPGKPFNPMINAGAITVASLLPGETAHDKLEYLFS    150

BSNT_00431___    151 VMETLIGKRPRIHEEVFRSEWETAHRNRALAYYLKETNFLEAEVEETLEV    200
                     |.|.||||||.||||||||||:||||||||||||||||||||:|||||||
RBAM_002800__    151 VFEKLIGKRPHIHEEVFRSEWQTAHRNRALAYYLKETNFLEADVEETLEV    200

BSNT_00431___    201 YLKQCAMESTTEDIALIGLILAHDGYHPIRREQVIPKDVAKLAKALMLTC    250
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_002800__    201 YLKQCAMEGTTEDIALIGLILAHDGYHPIRREQVIPKDVAKLAKALMLTC    250

BSNT_00431___    251 GMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFQSGCGIGIYGP    300
                     |||||||||||||||||||||||||||||||||||||||.:|||||||||
RBAM_002800__    251 GMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFHNGCGIGIYGP    300

BSNT_00431___    301 AIDEYGNSLTGGMLLKHMAQEWELSIF    327
                     |||||||||||||||||:|||||||||
RBAM_002800__    301 AIDEYGNSLTGGMLLKHIAQEWELSIF    327


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