Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00431 and RBAM_002800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:11
# Commandline: needle
# -asequence dna-align/BSNT_00431___ybgJ.1.9828.seq
# -bsequence dna-align/RBAM_002800___ybgJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00431___ybgJ-RBAM_002800___ybgJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00431___ybgJ-RBAM_002800___ybgJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00431___ybgJ
# 2: RBAM_002800___ybgJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 986
# Identity: 786/986 (79.7%)
# Similarity: 786/986 (79.7%)
# Gaps: 4/986 ( 0.4%)
# Score: 3106.0
#
#
#=======================================
BSNT_00431___ 1 ATGAAAGAATTGATAAAAGAGCACC-AGAAAGACATAAACCCGGCGTTAC 49
||||||||..||.|.|.|||||.|| .||||.|.|..|| |.|||.|.||
RBAM_002800__ 1 ATGAAAGATATGGTCAGAGAGCGCCTTGAAAAAGAGGAA-CTGGCTTCAC 49
BSNT_00431___ 50 AGCTTCATGATTGGGTTGAATACTATCGCCCTTTTGCCGCCAATGGACAA 99
...|.||.||||||||.||..|.||.||.||.|||.|||.|||||||.||
RBAM_002800__ 50 TTTTACAAGATTGGGTCGAGCATTACCGACCGTTTTCCGTCAATGGAAAA 99
BSNT_00431___ 100 AGCGCAAACTATATCCCCGCTTTAGGAAAAGTCAATGATTCACAGCTCGG 149
||||||||.|||||.|||||..|.|||.||.||||.||.||.|||||.||
RBAM_002800__ 100 AGCGCAAATTATATACCCGCCCTCGGAGAAATCAACGACTCTCAGCTGGG 149
BSNT_00431___ 150 CATCTGTGTATTGGAGCCTGATGGAACGATGATACACGCCGGCGACTGGA 199
|||.||..||||.|||||.|||||..|.|||||.||.|||||.||.||||
RBAM_002800__ 150 CATTTGCATATTAGAGCCGGATGGCTCAATGATTCATGCCGGTGAATGGA 199
BSNT_00431___ 200 ACGTCTCTTTTACCCTGCAAAGCATTTCAAAAGTGATTAGCTTTATTGCC 249
|.|||.|.||.||..||||.|||||.||||||||.||.||||||||||||
RBAM_002800__ 200 ATGTCCCGTTCACATTGCAGAGCATCTCAAAAGTCATCAGCTTTATTGCC 249
BSNT_00431___ 250 GCCTGCATGAGCCGCGGCATTCCCTATGTGCTGGACCGCGTAGATGTCGA 299
||||||||||.|.|.||||||.|.||.||||||||.||.||.||.||.||
RBAM_002800__ 250 GCCTGCATGAACAGAGGCATTTCTTACGTGCTGGATCGTGTGGACGTGGA 299
BSNT_00431___ 300 GCCGACAGGCGACGCCTTTAATTCAATCATCCGGCTCGAAATCAACAAGC 349
.|||||.||.||.||.||||||||.|||||||||||.||||||.|.||.|
RBAM_002800__ 300 ACCGACGGGTGATGCGTTTAATTCTATCATCCGGCTTGAAATCCATAAAC 349
BSNT_00431___ 350 CGGGGAAGCCCTTCAATCCCATGATCAACGCGGGCGCCCTCACCATCGCT 399
|.||||||||||||||.||.||||||||.||.||||||.|.|||.||||.
RBAM_002800__ 350 CCGGGAAGCCCTTCAACCCGATGATCAATGCCGGCGCCATTACCGTCGCC 399
BSNT_00431___ 400 TCGATTCTTCCCGGAGAATCGGCATACGAAAAGCTCGAGTTTCTTTACTC 449
|||.|.|||||.||.|||.||||..|.||.||..|.||.|.|||.|..||
RBAM_002800__ 400 TCGCTGCTTCCGGGTGAAACGGCGCATGATAAATTAGAATATCTCTTTTC 449
BSNT_00431___ 450 GGTGATGGAAACTTTGATAGGAAAACGGCCGAGA-ATTCATGAGGAAGTA 498
.||..|.||||..||.|||||||||| |||.|.| |||||.|||||.||.
RBAM_002800__ 450 CGTTTTTGAAAAATTAATAGGAAAAC-GCCCACACATTCACGAGGAGGTC 498
BSNT_00431___ 499 TTCCGTTCTGAATGGGAAACCGCCCACCGCAACAGAGCGCTGGCCTACTA 548
|||||||||||||||.|.|||||.||.||.|||.|||||||.||||||||
RBAM_002800__ 499 TTCCGTTCTGAATGGCAGACCGCGCATCGGAACCGAGCGCTCGCCTACTA 548
BSNT_00431___ 549 TTTAAAAGAAACAAACTTTTTAGAAGCTGAAGTAGAAGAAACACTTGAGG 598
||||||||||||.||||||.|.||.||.||.||.||||||||.|||||.|
RBAM_002800__ 549 TTTAAAAGAAACGAACTTTCTCGAGGCGGATGTGGAAGAAACGCTTGAAG 598
BSNT_00431___ 599 TGTACTTGAAGCAATGCGCTATGGAGAGCACCACAGAAGATATTGCGTTG 648
||||.||.|||||.|||||.||||||.|.||.||.||.||.||.||.||.
RBAM_002800__ 599 TGTATTTAAAGCAGTGCGCCATGGAGGGTACAACCGAGGACATCGCTTTA 648
BSNT_00431___ 649 ATCGGCCTGATCCTTGCTCATGACGGGTATCATCCGATTCGACGCGAGCA 698
|||||..||||.|||||.||||||||.||.||||||||.|||||.||.||
RBAM_002800__ 649 ATCGGATTGATACTTGCGCATGACGGATACCATCCGATCCGACGGGAACA 698
BSNT_00431___ 699 GGTGATTCCAAAAGATGTGGCAAAATTGGCCAAGGCGTTAATGCTGACGT 748
|||.|||||.||||||||.||.|||.|.|||||.||..|.||||||||||
RBAM_002800__ 699 GGTCATTCCGAAAGATGTCGCGAAACTCGCCAAAGCCCTGATGCTGACGT 748
BSNT_00431___ 749 GCGGCATGTACAACGCTTCAGGCAAATATGCGGCGTTTGTCGGCGTGCCG 798
||||.||||||||.||.|||||||||||||||||.||.||||||||.|||
RBAM_002800__ 749 GCGGAATGTACAATGCGTCAGGCAAATATGCGGCTTTCGTCGGCGTCCCG 798
BSNT_00431___ 799 GCCAAAAGCGGCGTCTCCGGCGGCATCATGGCGCTGGTGCCTCCAAGCGC 848
|||||||||||.||.|||||||||||.|||||..||||.||.||||||||
RBAM_002800__ 799 GCCAAAAGCGGGGTATCCGGCGGCATTATGGCATTGGTTCCCCCAAGCGC 848
BSNT_00431___ 849 CAGAAGAGAACAGCCTTTTCAATCCGGATGCGGCATCGGCATTTACGGGC 898
|||||||||||||||||||||...|||.||||||||||||||||||||.|
RBAM_002800__ 849 CAGAAGAGAACAGCCTTTTCATAACGGCTGCGGCATCGGCATTTACGGTC 898
BSNT_00431___ 899 CTGCCATTGATGAATACGGTAACAGCCTCACTGGCGGTATGCTGCTGAAG 948
|.|||||||||||||||||.||||||||.||.|||||.|||||||||||.
RBAM_002800__ 899 CGGCCATTGATGAATACGGCAACAGCCTGACCGGCGGCATGCTGCTGAAA 948
BSNT_00431___ 949 CATATGGCGCAGGAGTGGGAGCTCAGCATTTTTTAA 984
|||||.||.|||||||||||||||||.|||||||||
RBAM_002800__ 949 CATATCGCACAGGAGTGGGAGCTCAGTATTTTTTAA 984
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