Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00417 and RBAM_002750

See DNA alignment / Visit BSNT_00417 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence pep-align/BSNT_00417___gltP.1.9828.seq
#    -bsequence pep-align/RBAM_002750___gltP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00417___gltP-RBAM_002750___gltP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00417___gltP-RBAM_002750___gltP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00417___gltP
# 2: RBAM_002750___gltP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity:     381/416 (91.6%)
# Similarity:   400/416 (96.2%)
# Gaps:           2/416 ( 0.5%)
# Score: 1884.5
# 
#
#=======================================

BSNT_00417___      1 MKKLIAFQILIALAVGAVIGHFFPDFGMALRPVGDGFIRLIKMIVVPIVF     50
                     |||.||||||||||:||:||||||||||||||||||||||||||||||||
RBAM_002750__      1 MKKFIAFQILIALAIGALIGHFFPDFGMALRPVGDGFIRLIKMIVVPIVF     50

BSNT_00417___     51 STIVIGAAGSGSMKKMGSLGIKTIIWFEVITTLVLGLGLLLANVLKPGVG    100
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
RBAM_002750__     51 STIVIGAAGSGSMKKMGSLGIKTIIWFEVITTLVLALGLLLANVLKPGVG    100

BSNT_00417___    101 LDLSHLAKKDIHELSGYTDKVVDFKQMVLDIIPTNIIDVMARNDLLAVIF    150
                     |:||||||||||||||||:||||.|||:|||||.|||||||:||||||||
RBAM_002750__    101 LNLSHLAKKDIHELSGYTEKVVDLKQMLLDIIPVNIIDVMAKNDLLAVIF    150

BSNT_00417___    151 FAILFGVAAAGIGKASEPVMKFFESTAQIMFKLTQIVMVTAPIGVLALMA    200
                     ||||||||||||||||.|||.||||||.|||||||:||||||||||||||
RBAM_002750__    151 FAILFGVAAAGIGKASAPVMSFFESTANIMFKLTQMVMVTAPIGVLALMA    200

BSNT_00417___    201 ASVGQYGIELLLPMFKLVGTVFLGLFLILFVLFPLVGLIFQIKYFEVLKM    250
                     |||||:||.|||||.||:||||||||||||||||:|||||:|||||||||
RBAM_002750__    201 ASVGQFGIALLLPMLKLIGTVFLGLFLILFVLFPIVGLIFKIKYFEVLKM    250

BSNT_00417___    251 IWDLFLIAFSTTSTETILPQLMDRMEKYGCPKRVVSFVVPSGLSLNCDGS    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002750__    251 IWDLFLIAFSTTSTETILPQLMDRMEKYGCPKRVVSFVVPSGLSLNCDGS    300

BSNT_00417___    301 SLYLSVSCIFLAQAFQVDMTLSQQLLMMLVLVMTSKGIAAVPSGSLVVLL    350
                     |||||||||||||||.|:|.||||||||||||||||||||||||||||||
RBAM_002750__    301 SLYLSVSCIFLAQAFHVEMPLSQQLLMMLVLVMTSKGIAAVPSGSLVVLL    350

BSNT_00417___    351 ATANAVGLPAEGVAIIAGVDRVMDMARTGVNVPGHAIACIVVSKWEKAFR    400
                     ||||||||||||||||||||||||||||||||||||:||||||||||||:
RBAM_002750__    351 ATANAVGLPAEGVAIIAGVDRVMDMARTGVNVPGHAVACIVVSKWEKAFK    400

BSNT_00417___    401 QKEWVSAN--SQTESI    414
                     .|..|:|:  ::|||:
RBAM_002750__    401 YKGPVTADQTARTESM    416


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