Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00417 and RBAM_002750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:11
# Commandline: needle
# -asequence dna-align/BSNT_00417___gltP.1.9828.seq
# -bsequence dna-align/RBAM_002750___gltP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00417___gltP-RBAM_002750___gltP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00417___gltP-RBAM_002750___gltP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00417___gltP
# 2: RBAM_002750___gltP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1256
# Identity: 994/1256 (79.1%)
# Similarity: 994/1256 (79.1%)
# Gaps: 16/1256 ( 1.3%)
# Score: 3921.0
#
#
#=======================================
BSNT_00417___ 1 TTGAAAAAATTAATCGCGTTTCAAATTTTAATCGCTTTGGCTGTCGGCGC 50
|||||||||||.|||||.||.||.|||||.||||||||.||..||||.||
RBAM_002750__ 1 TTGAAAAAATTTATCGCATTCCAGATTTTGATCGCTTTAGCCATCGGAGC 50
BSNT_00417___ 51 GGTGATCGGCCACTTTTTTCCTGATTTCGGGATGGCACTGAGGCCTGTCG 100
..|||||||||||||.||.||.||||||||||||||.|||.||||.||||
RBAM_002750__ 51 ATTGATCGGCCACTTCTTCCCGGATTTCGGGATGGCGCTGCGGCCCGTCG 100
BSNT_00417___ 101 GAGATGGATTTATCCGCCTGATTAAAATGATTGTTGTGCCGATTGTATTT 150
||||.|||||||||||||||||||||||||||||.||||||||.||.|||
RBAM_002750__ 101 GAGACGGATTTATCCGCCTGATTAAAATGATTGTCGTGCCGATCGTGTTT 150
BSNT_00417___ 151 TCTACCATTGTCATTGGAGCCGCAGGAAGCGGAAGCATGAAAAAAATGGG 200
||.||||||||.||.||||||||.||.|||||.||.||||||||.|||||
RBAM_002750__ 151 TCGACCATTGTTATCGGAGCCGCCGGCAGCGGCAGTATGAAAAAGATGGG 200
BSNT_00417___ 201 CAGCCTCGGCATCAAGACGATCATTTGGTTCGAAGTGATTACAACGTTGG 250
|||.|||||||||||.|||||.||||||||.|||||||||||.|||.|.|
RBAM_002750__ 201 CAGTCTCGGCATCAAAACGATTATTTGGTTTGAAGTGATTACGACGCTTG 250
BSNT_00417___ 251 TATTAGGGCTTGGACTTTTATTAGCGAATGTCTTAAAACCAGGTGTCGGG 300
|..|.|.|||.||.||.|||||.|||||.||..|.||.||.||.|||||.
RBAM_002750__ 251 TTCTGGCGCTCGGTCTGTTATTGGCGAACGTGCTGAAGCCGGGAGTCGGA 300
BSNT_00417___ 301 CTTGACCTCTCCCATTTGGCAAAAAAAGATATTCATGAACTTTCCGGCTA 350
|||.|||||||.|||.|.||.||||||||||||||.||.|||||||||||
RBAM_002750__ 301 CTTAACCTCTCTCATCTTGCTAAAAAAGATATTCACGAGCTTTCCGGCTA 350
BSNT_00417___ 351 CACAGACAAAGTTGTTGATTTCAAGCAAATGGTCCTGGATATTATCCCTA 400
.||.||.|||||.||.||..|.||.||||||.|.||.|||||||||||..
RBAM_002750__ 351 TACGGAAAAAGTAGTCGACCTGAAACAAATGCTTCTTGATATTATCCCCG 400
BSNT_00417___ 401 CAAACATTATTGATGTCATGGCCAGAAATGATTTGCTTGCCGTTATTTTC 450
..|||||||||||.||||||||.|.|||.|||.|.||.|||||.|||||.
RBAM_002750__ 401 TTAACATTATTGACGTCATGGCGAAAAACGATCTTCTCGCCGTCATTTTT 450
BSNT_00417___ 451 TTCGCCATTTTATTTGGTGTCGCCGCAGCTGGTATCGGCAAAGCTTCTGA 500
|||||.||||||||.|||||.||||||||.||.|||||||||||.||.|.
RBAM_002750__ 451 TTCGCGATTTTATTCGGTGTTGCCGCAGCCGGCATCGGCAAAGCCTCCGC 500
BSNT_00417___ 501 ACCAGTAATGAAGTTT-TTTGAATCTACCGCTCAGATTATGTTCAAGCTC 549
|||.||.||| ||||| ||.|||||.||.||..|.||||||||||||||.
RBAM_002750__ 501 ACCTGTCATG-AGTTTCTTCGAATCCACGGCAAATATTATGTTCAAGCTG 549
BSNT_00417___ 550 ACGCAAATCGTCATGGTCACTGCTCCTATCGGCGTGTTAGCCCTGATGGC 599
||||||||.||.||||||||.|||||.||||||||..|.|||||||||||
RBAM_002750__ 550 ACGCAAATGGTAATGGTCACCGCTCCGATCGGCGTTCTCGCCCTGATGGC 599
BSNT_00417___ 600 AGCTTCTGTGGGCCAATATGGCATTGAACTCCTCCTCCCTATGTTTAAGC 649
.||.|||||.||.||||..||.||.|..||..|.||.||.|||.|.||||
RBAM_002750__ 600 CGCCTCTGTCGGGCAATTCGGAATCGCGCTTTTGCTTCCGATGCTGAAGC 649
BSNT_00417___ 650 TGGTTGGCACCGTATTCCTTGGCCTGTTCCTGATCCTCTTTGTCCTCTTT 699
||.|.|||||.||.|||||.||.|||||||||||.|||||.||.||.|||
RBAM_002750__ 650 TGATCGGCACTGTGTTCCTCGGGCTGTTCCTGATACTCTTCGTTCTGTTT 699
BSNT_00417___ 700 CCGCTTGTCGGTCTCATCTTTCAGATTAAGTATTTCGAAGTATTGAAAAT 749
|||.|.||.||.||.||||||.|.||.||.||.||.|||||..|||||||
RBAM_002750__ 700 CCGATCGTGGGGCTTATCTTTAAAATCAAATACTTTGAAGTGCTGAAAAT 749
BSNT_00417___ 750 GATATGGGATCTGTTTTTAATTGCATTTTCCACCACCAGCACTGAAACCA 799
|||.|||||.||||||||.||.||.||.|||||.||.|||||.|||||||
RBAM_002750__ 750 GATTTGGGACCTGTTTTTGATCGCTTTCTCCACGACAAGCACAGAAACCA 799
BSNT_00417___ 800 TTCTCCCTCAGCTGATGGATAGAATGGAGAAATACGGCTGTCCCAAACGA 849
||||.|||||||||||||||.|.||||||||||||||||||||.||.||.
RBAM_002750__ 800 TTCTGCCTCAGCTGATGGATCGGATGGAGAAATACGGCTGTCCGAAGCGG 849
BSNT_00417___ 850 GTGGTATCATTTGTCGTTCCCTCCGGCTTGTCATTGAACTGTGACGGCTC 899
||.||.||.|||||.|||||.||.||.||.||..||||||||||||||||
RBAM_002750__ 850 GTCGTCTCCTTTGTGGTTCCGTCAGGTTTATCGCTGAACTGTGACGGCTC 899
BSNT_00417___ 900 CAGCTTATATTTATCGGTTTCTTGTATCTTTCTCGCACAGGCCTTTCAAG 949
.|||.|.|||||||||||.||.|||||.||.||.||.|||||.|||||.|
RBAM_002750__ 900 AAGCCTCTATTTATCGGTGTCCTGTATTTTCCTGGCGCAGGCGTTTCATG 949
BSNT_00417___ 950 TAGACATGACATTGTCCCAGCAGCTGCTCATGATGCTTGTGCTTGTGATG 999
|.||.|||.|..|.||.||||||||.||.|||||||||||.||.||.|||
RBAM_002750__ 950 TGGAAATGCCGCTTTCTCAGCAGCTTCTGATGATGCTTGTCCTCGTCATG 999
BSNT_00417___ 1000 ACCAGTAAAGGCATTGCAGCTGTACCCTCAGGATCGCTTGTAGTTCTTCT 1049
||.||.|||||||||||.||.||.||.|||||.||.||.||.||.|||||
RBAM_002750__ 1000 ACAAGCAAAGGCATTGCCGCCGTCCCGTCAGGCTCACTCGTCGTGCTTCT 1049
BSNT_00417___ 1050 GGCGACTGCCAATGCTGTAGGACTGCCGGCTGAAGGCGTTGCCATTATAG 1099
||||||.||.|||||.||.||.||.||.||.||||||||.|||||.||.|
RBAM_002750__ 1050 GGCGACAGCGAATGCCGTCGGTCTCCCCGCGGAAGGCGTCGCCATCATTG 1099
BSNT_00417___ 1100 CGGGTGTTGACCGCGTCATGGACATGGCGAGAACGGGCGTGAACGTACCG 1149
|.|||||.||||||||||||||||||||||||||.|||||.|||||.||.
RBAM_002750__ 1100 CCGGTGTCGACCGCGTCATGGACATGGCGAGAACCGGCGTCAACGTGCCC 1149
BSNT_00417___ 1150 GGACATGCGATCGCCTGTATCGTGGTATCAAAATGGGAAAAGGCCTTCCG 1199
||.||||||.|||||||.|||||.||.||.||.||||||||.||.||
RBAM_002750__ 1150 GGCCATGCGGTCGCCTGCATCGTCGTGTCCAAGTGGGAAAAAGCATT--- 1196
BSNT_00417___ 1200 CCAAAAAGAATGG----GTTTCCGCA-AACAG-----CCAAACTGAAAGC 1239
||||.|.||.|| ||..|.||| |.||| ||..||.|||||.
RBAM_002750__ 1197 -CAAATATAAAGGACCCGTCACGGCAGACCAGACCGCCCGGACAGAAAGT 1245
BSNT_00417___ 1240 ATATAG 1245
||.||.
RBAM_002750__ 1246 ATGTAA 1251
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