Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00416 and RBAM_002740

See DNA alignment / Visit BSNT_00416 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence pep-align/BSNT_00416___ybfQ.1.9828.seq
#    -bsequence pep-align/RBAM_002740___ybfQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00416___ybfQ-RBAM_002740___ybfQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00416___ybfQ-RBAM_002740___ybfQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00416___ybfQ
# 2: RBAM_002740___ybfQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     279/322 (86.6%)
# Similarity:   305/322 (94.7%)
# Gaps:           0/322 ( 0.0%)
# Score: 1561.0
# 
#
#=======================================

BSNT_00416___      1 MEKQYRVLLYYKYVPIEDPEAFREQHLAFCKELGLLGRILVSSEGINGTV     50
                     ||||||||||||||.|::||.|..|||.||||||||||||:|.|||||||
RBAM_002740__      1 MEKQYRVLLYYKYVKIDEPEEFTAQHLKFCKELGLLGRILISEEGINGTV     50

BSNT_00416___     51 SGTVEQTEKYMETMKADPRFADMVFKIDEAEGHAFKKIFVRHKKELVTLR    100
                     ||||||||:||..:|||||||||..|||||:||||:|:||||||||||||
RBAM_002740__     51 SGTVEQTEQYMNALKADPRFADMPIKIDEADGHAFRKMFVRHKKELVTLR    100

BSNT_00416___    101 LEDDVDPNETTGQHLKPAEFYEKMQDPNTIVIDARNDYEYDLGHFRGAVR    150
                     ||||||||.|||:||||.:|||:||||:||||||||||||||||||||||
RBAM_002740__    101 LEDDVDPNVTTGKHLKPKDFYEQMQDPDTIVIDARNDYEYDLGHFRGAVR    150

BSNT_00416___    151 PDIEAFRELPEWIEEHKDMLEGKKILTYCTGGVRCEKFSGWLVKQGFEDV    200
                     ||||||||||:|||||||||||||||||||||||||||||||:|:|||||
RBAM_002740__    151 PDIEAFRELPDWIEEHKDMLEGKKILTYCTGGVRCEKFSGWLLKKGFEDV    200

BSNT_00416___    201 AQLDGGIVTYGKDPEVQGKLWDGQCYVFDERISVPVNRVEHVIVGKDYFT    250
                     :|||||||||||||||:|::|||||||||||||||||||||||:||||||
RBAM_002740__    201 SQLDGGIVTYGKDPEVKGQMWDGQCYVFDERISVPVNRVEHVIIGKDYFT    250

BSNT_00416___    251 GEPCERYVNCANPSCNKKMICTPENEYKYMRSCSHECRTNPRNLYVKEHN    300
                     |||||||||||||:||||||||||||||||||||||||||.||:|||||:
RBAM_002740__    251 GEPCERYVNCANPACNKKMICTPENEYKYMRSCSHECRTNERNMYVKEHD    300

BSNT_00416___    301 MTEEEVNARLAAIETEDHAAAE    322
                     ||:||:|.|||.||.|||||.:
RBAM_002740__    301 MTQEEINERLALIEKEDHAAID    322


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