Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00416 and RBAM_002740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence pep-align/BSNT_00416___ybfQ.1.9828.seq
# -bsequence pep-align/RBAM_002740___ybfQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00416___ybfQ-RBAM_002740___ybfQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00416___ybfQ-RBAM_002740___ybfQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00416___ybfQ
# 2: RBAM_002740___ybfQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity: 279/322 (86.6%)
# Similarity: 305/322 (94.7%)
# Gaps: 0/322 ( 0.0%)
# Score: 1561.0
#
#
#=======================================
BSNT_00416___ 1 MEKQYRVLLYYKYVPIEDPEAFREQHLAFCKELGLLGRILVSSEGINGTV 50
||||||||||||||.|::||.|..|||.||||||||||||:|.|||||||
RBAM_002740__ 1 MEKQYRVLLYYKYVKIDEPEEFTAQHLKFCKELGLLGRILISEEGINGTV 50
BSNT_00416___ 51 SGTVEQTEKYMETMKADPRFADMVFKIDEAEGHAFKKIFVRHKKELVTLR 100
||||||||:||..:|||||||||..|||||:||||:|:||||||||||||
RBAM_002740__ 51 SGTVEQTEQYMNALKADPRFADMPIKIDEADGHAFRKMFVRHKKELVTLR 100
BSNT_00416___ 101 LEDDVDPNETTGQHLKPAEFYEKMQDPNTIVIDARNDYEYDLGHFRGAVR 150
||||||||.|||:||||.:|||:||||:||||||||||||||||||||||
RBAM_002740__ 101 LEDDVDPNVTTGKHLKPKDFYEQMQDPDTIVIDARNDYEYDLGHFRGAVR 150
BSNT_00416___ 151 PDIEAFRELPEWIEEHKDMLEGKKILTYCTGGVRCEKFSGWLVKQGFEDV 200
||||||||||:|||||||||||||||||||||||||||||||:|:|||||
RBAM_002740__ 151 PDIEAFRELPDWIEEHKDMLEGKKILTYCTGGVRCEKFSGWLLKKGFEDV 200
BSNT_00416___ 201 AQLDGGIVTYGKDPEVQGKLWDGQCYVFDERISVPVNRVEHVIVGKDYFT 250
:|||||||||||||||:|::|||||||||||||||||||||||:||||||
RBAM_002740__ 201 SQLDGGIVTYGKDPEVKGQMWDGQCYVFDERISVPVNRVEHVIIGKDYFT 250
BSNT_00416___ 251 GEPCERYVNCANPSCNKKMICTPENEYKYMRSCSHECRTNPRNLYVKEHN 300
|||||||||||||:||||||||||||||||||||||||||.||:|||||:
RBAM_002740__ 251 GEPCERYVNCANPACNKKMICTPENEYKYMRSCSHECRTNERNMYVKEHD 300
BSNT_00416___ 301 MTEEEVNARLAAIETEDHAAAE 322
||:||:|.|||.||.|||||.:
RBAM_002740__ 301 MTQEEINERLALIEKEDHAAID 322
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