Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00416 and RBAM_002740
See
Amino acid alignment /
Visit
BSNT_00416 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_00416___ybfQ.1.9828.seq
# -bsequence dna-align/RBAM_002740___ybfQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00416___ybfQ-RBAM_002740___ybfQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00416___ybfQ-RBAM_002740___ybfQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00416___ybfQ
# 2: RBAM_002740___ybfQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 971
# Identity: 777/971 (80.0%)
# Similarity: 777/971 (80.0%)
# Gaps: 4/971 ( 0.4%)
# Score: 3085.0
#
#
#=======================================
BSNT_00416___ 1 ATGGAAAAACAATACAGAGTATTACTTTACTATAAATATGTTCCGATTGA 50
||||||||||||||.|||||.||||||||.|||||||||||...||||||
RBAM_002740__ 1 ATGGAAAAACAATATAGAGTTTTACTTTATTATAAATATGTAAAGATTGA 50
BSNT_00416___ 51 AGATCCAGAGGCGTTTAGAGAGCAGCATCTGGCTTTTTGTAAGGAGCTTG 100
.||.||.||.|.|||.|..|..||||||.||...||||||||||||||.|
RBAM_002740__ 51 TGAGCCTGAAGAGTTCACGGCTCAGCATTTGAAGTTTTGTAAGGAGCTCG 100
BSNT_00416___ 101 GTTTGTTAGGCCGTATCCTTG-TTTCTTCTGAAGGAATTAACGGTACGGT 149
||.||||||||||||| .||| |||||...|||||.||||||||||||||
RBAM_002740__ 101 GTCTGTTAGGCCGTAT-TTTGATTTCTGAAGAAGGCATTAACGGTACGGT 149
BSNT_00416___ 150 ATCAGGTACGGTTGAACAGACTGAAAAATATATGGAAACAATGAAAGCTG 199
.||.||.||||||||||||||.|||.||||.|||.|..|..|||||||||
RBAM_002740__ 150 GTCCGGAACGGTTGAACAGACGGAACAATACATGAATGCGCTGAAAGCTG 199
BSNT_00416___ 200 ATCCTCGCTTTGCGGACATGGTATTTAAAATTGATGAAGCAGAAGGCCAT 249
||||.||||||||.||||||....|.||||||||.||.||.||.||.|||
RBAM_002740__ 200 ATCCGCGCTTTGCCGACATGCCGATCAAAATTGACGAGGCTGACGGACAT 249
BSNT_00416___ 250 GCCTTCAAAAAAATCTTCGTCCGCCATAAAAAAGAGCTTGTAACGCTTCG 299
||.|||...|||||.||.||.||||||||||||||..|.||.||||||||
RBAM_002740__ 250 GCATTCCGCAAAATGTTTGTGCGCCATAAAAAAGAATTGGTGACGCTTCG 299
BSNT_00416___ 300 TCTTGAAGATGATGTCGATCCGAACGAAACAACAGGCCAGCATTTGAAGC 349
|||.|||||||||||.||||||||.|..||.||.|||.||||||||||.|
RBAM_002740__ 300 TCTCGAAGATGATGTTGATCCGAATGTCACGACGGGCAAGCATTTGAAAC 349
BSNT_00416___ 350 CTGCAGAATTTTATGAGAAGATGCAGGATCCAAACACAATTGTCATCGAC 399
|...|||.|||||||||.|.|||||||||||..||||.||.||.||||||
RBAM_002740__ 350 CGAAAGATTTTTATGAGCAAATGCAGGATCCTGACACGATCGTGATCGAC 399
BSNT_00416___ 400 GCGCGTAACGATTACGAGTATGACCTTGGCCATTTCAGAGGTGCGGTCCG 449
||..|.|||||.||.|||||||||||.||.||||||.|.||.||||||.|
RBAM_002740__ 400 GCCAGAAACGACTATGAGTATGACCTCGGTCATTTCCGCGGAGCGGTCAG 449
BSNT_00416___ 450 TCCTGACATCGAAGCCTTCCGTGAATTACCTGAATGGATTGAAGAGCACA 499
.|||||.||.||.||.||||||||..|.||.||.||||||||||||||||
RBAM_002740__ 450 ACCTGATATTGAGGCGTTCCGTGAGCTGCCGGACTGGATTGAAGAGCACA 499
BSNT_00416___ 500 AAGATATGCTTGAAGGCAAAAAGATTTTAACGTACTGTACAGGCGGCGTG 549
||||.|||||||||||||||||.||..|.||||||||.|||||||||||.
RBAM_002740__ 500 AAGACATGCTTGAAGGCAAAAAAATCCTCACGTACTGCACAGGCGGCGTA 549
BSNT_00416___ 550 CGCTGTGAAAAGTTCTCAGGATGGCTGGTGAAGCAAGGCTTTGAAGATGT 599
|||||||||||.||.||.||.||||||.|||||.|.|||||||||||.||
RBAM_002740__ 550 CGCTGTGAAAAATTTTCCGGCTGGCTGCTGAAGAAGGGCTTTGAAGACGT 599
BSNT_00416___ 600 AGCTCAGCTTGATGGCGGAATCGTGACATACGGAAAAGATCCAGAGGTGC 649
..|.||||||||.|||||.|||||.||.|||||.||||||||.||.|||.
RBAM_002740__ 600 GTCCCAGCTTGACGGCGGTATCGTCACTTACGGTAAAGATCCTGAAGTGA 649
BSNT_00416___ 650 AA-GGCAAGCTTTGGGACGGCCAGTGCTACGTATTTGATGAAAGAATCAG 698
|| ||||| .|.||||||||.|||||||||||.|||||.|||||||||||
RBAM_002740__ 650 AAGGGCAA-ATGTGGGACGGACAGTGCTACGTGTTTGACGAAAGAATCAG 698
BSNT_00416___ 699 CGTGCCTGTCAACCGTGTCGAGCATGTGATTGTCGGCAAGGACTACTTTA 748
|||.||.||||||||.||.|||||.||.||..||||.||.|||||.||.|
RBAM_002740__ 699 CGTACCGGTCAACCGCGTAGAGCACGTTATCATCGGAAAAGACTATTTCA 748
BSNT_00416___ 749 CAGGAGAACCGTGTGAGCGTTATGTGAACTGCGCAAATCCATCTTGCAAT 798
|.||.||.|||||.|||||||||||||||||.||||||||..|.||.|||
RBAM_002740__ 749 CGGGCGAGCCGTGCGAGCGTTATGTGAACTGTGCAAATCCGGCATGTAAT 798
BSNT_00416___ 799 AAAAAAATGATATGCACACCGGAAAATGAGTATAAATATATGCGCAGCTG 848
|||||||||||.||||||||.||.|||||.||.|||||.|||||||||||
RBAM_002740__ 799 AAAAAAATGATCTGCACACCTGAGAATGAATACAAATACATGCGCAGCTG 848
BSNT_00416___ 849 CAGCCACGAATGCCGCACGAACCCAAGAAACCTGTATGTGAAAGAGCATA 898
|||.|||||||||||.||||||..|.|.|||.||||||||||||||||..
RBAM_002740__ 849 CAGTCACGAATGCCGTACGAACGAACGCAACATGTATGTGAAAGAGCACG 898
BSNT_00416___ 899 ATATGACAGAAGAAGAAGTAAACGCAAGACTGGCAGCGATTGAAACAGAA 948
|||||||..|.||||||.|.||.|.|.|.||.||...||||||||.|||.
RBAM_002740__ 899 ATATGACTCAGGAAGAAATCAATGAACGCCTTGCTTTGATTGAAAAAGAG 948
BSNT_00416___ 949 GATCACGCTGCTGCTGAATAA 969
|||||.||.||...|||.|||
RBAM_002740__ 949 GATCATGCGGCGATTGATTAA 969
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.