Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00409 and RBAM_002720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence pep-align/BSNT_00409___psd.1.9828.seq
# -bsequence pep-align/RBAM_002720___psd.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00409___psd-RBAM_002720___psd.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00409___psd-RBAM_002720___psd.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00409___psd
# 2: RBAM_002720___psd
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity: 201/271 (74.2%)
# Similarity: 230/271 (84.9%)
# Gaps: 8/271 ( 3.0%)
# Score: 1081.0
#
#
#=======================================
BSNT_00409___ 1 MFNTAVKILYRSLIELTNHRLSSYLIKGFCESKISKPVIPLFSKHFRLNW 50
|||||.|:||||||||||:||:|||||.|||||:|||:|||||||:|:||
RBAM_002720__ 1 MFNTAAKVLYRSLIELTNNRLTSYLIKNFCESKLSKPMIPLFSKHYRINW 50
BSNT_00409___ 51 DDVDGTAADYGSLSELFIRQINLERRPVSKEAHAVVSPVDGVVQTVGIIN 100
::.:.||:|:.||:..|||.|||..|||:||.:|:||||||||||||:|.
RBAM_002720__ 51 NETERTASDFDSLASFFIRDINLNLRPVAKEKNAIVSPVDGVVQTVGMIK 100
BSNT_00409___ 101 PNQTFTVKGKDYSFAELTGCKSADHQYNGGYFVVLYLSPRHYHRFHSPIS 150
|||||.|||||||||||||.|||||:||||.|.|||||||||||||||:|
RBAM_002720__ 101 PNQTFMVKGKDYSFAELTGFKSADHKYNGGCFAVLYLSPRHYHRFHSPVS 150
BSNT_00409___ 151 CRYQKLAELGNRSYPVNQLGLKYGKDVLSKNYRFVYELNSGSRNVLMIPV 200
|.||||||||.||||||.:||||||||||||||:||||....:.:|||||
RBAM_002720__ 151 CTYQKLAELGKRSYPVNTMGLKYGKDVLSKNYRYVYELTRADQQMLMIPV 200
BSNT_00409___ 201 GAMNINSIVQTNTRTELEIGEELGYFSFGSTVILIFEKDAFQPSAHLAEG 250
|||||||||||||...||.|||||||||||||||:||||.|.||.:|.||
RBAM_002720__ 201 GAMNINSIVQTNTGNRLETGEELGYFSFGSTVILVFEKDMFTPSDNLTEG 250
BSNT_00409___ 251 QEVQVGELIGYEE-------- 263
:|:|||::|||.|
RBAM_002720__ 251 RELQVGQIIGYAESQEEASAL 271
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