Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00385 and RBAM_002640

See DNA alignment / Visit BSNT_00385 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence pep-align/BSNT_00385.1.9828.seq
#    -bsequence pep-align/RBAM_002640___ybfE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00385-RBAM_002640___ybfE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00385-RBAM_002640___ybfE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00385
# 2: RBAM_002640___ybfE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:      31/109 (28.4%)
# Similarity:    37/109 (33.9%)
# Gaps:          56/109 (51.4%)
# Score: 150.0
# 
#
#=======================================

BSNT_00385         0 --------------------------------------------------      0
                                                                       
RBAM_002640__      1 MKQDSLTLNQMKMCFTEPPLTFQHTVKIVCTVTFITLYIFFFSTHFNDLI     50

BSNT_00385         1 -----MFFALIGLFLGFYRFPIFKKFQISERFKQKSENARIVGMINFVLE     45
                          |.|.|.||......||..:|.|:|:||:|||||.||.|||:||||
RBAM_002640__     51 EMALQMVFGLAGLVWIIAVFPFSRKIQVSDRFRQKSENTRITGMIDFVLE    100

BSNT_00385        46 QKYKKSISE     54
                     |:||..|| 
RBAM_002640__    101 QRYKDMIS-    108


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.